RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 LRIT3Q3SXY7 679 aa12.74□□□□□ -0.37
PTP4A2-216ENST00000534796 ZNF444Q8N0Y2 327 aaPredicted RBP12.74□□□□□ -0.37
PTP4A2-216ENST00000534796 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
PTP4A2-216ENST00000534796 TRPV1Q8NER1 839 aa12.74□□□□□ -0.37
PTP4A2-216ENST00000534796 MAML3Q96JK9 1138 aa12.74□□□□□ -0.37
PTP4A2-216ENST00000534796 MMP19Q99542 508 aa12.74□□□□□ -0.37
PTP4A2-216ENST00000534796 PRKAG2Q9UGJ0 569 aa12.74□□□□□ -0.37
PTP4A2-216ENST00000534796 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 SMIM22K7EJ46 135 aa12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 FAM83BQ5T0W9 1011 aa12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 LBHD1Q9BQE6 289 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 SLF1Q9BQI6 1058 aa12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 TEX13BQ9BXU2 312 aa12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 ZNF214Q9UL59 606 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 CTDP1Q9Y5B0 961 aaPredicted RBP12.73□□□□□ -0.37
PTP4A2-216ENST00000534796 MYH8P13535 1937 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 ALPK3Q96L96 1907 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 BAZ2AQ9UIF9 1905 aaKnown RBP12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 F5H6K3 240 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 SOX1O00570 391 aaPredicted RBP12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 PDE4BQ07343 736 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 KLRC3Q07444 240 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 TSHZ3Q63HK5 1081 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 MSL3Q8N5Y2 521 aaKnown RBP12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 PRPF38AQ8NAV1 312 aaKnown RBP12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 LRCH3Q96II8 777 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 FBXO28Q9NVF7 368 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 MYH7P12883 1935 aa12.72□□□□□ -0.37
PTP4A2-216ENST00000534796 RLFQ13129 1914 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 ZBED4O75132 1171 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 TTLL1O95922 423 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 NDUFB10O96000 172 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 RARBP10826 455 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 GJC2Q5T442 439 aaPredicted RBP12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 IFNL3Q8IZI9 196 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 REPS2Q8NFH8 660 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 MKL1Q969V6 931 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 TINF2Q9BSI4 451 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 FSD1Q9BTV5 496 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 EPB41L4AQ9HCS5 686 aaPredicted RBP12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 CLIP2Q9UDT6 1046 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 CNPY2Q9Y2B0 182 aa12.71□□□□□ -0.37
PTP4A2-216ENST00000534796 IGKV6D-41A0A0C4DH26 115 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 M0R2C6 588 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 ATP2A1O14983 1001 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 FDX1P10109 184 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 MX1P20591 662 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 RTP1P59025 263 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 ZNF792Q3KQV3 632 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 SNRNP48Q6IEG0 339 aaKnown RBP12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 SLC39A5Q6ZMH5 540 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 RNF180Q86T96 592 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 STK11IPQ8N1F8 1099 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 GMCL1P1Q8NEA9 526 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 PI4K2BQ8TCG2 481 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 NAPBQ9H115 298 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 XPNPEP3Q9NQH7 507 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 MTMR4Q9NYA4 1195 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 FBXO40Q9UH90 709 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 FEM1BQ9UK73 627 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 PCDHB15Q9Y5E8 787 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 SZT2Q5T011 3432 aa12.7□□□□□ -0.38
PTP4A2-216ENST00000534796 PGK2P07205 417 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 TSPY3P0CV98 308 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 TSPY8P0CW00 308 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 AKR1A1P14550 325 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 OAZ1P54368 228 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 MDM2Q00987 491 aaPredicted RBP12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 LRRC41Q15345 812 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 FAM47AQ5JRC9 791 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 ZMYM1Q5SVZ6 1142 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 PRAMEF19Q5SWL8 479 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 C1orf53Q5VUE5 145 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 NEDD1Q8NHV4 660 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 CEP95Q96GE4 821 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 NUP88Q99567 741 aaPredicted RBP12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 ATP11BQ9Y2G3 1177 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 LAMA3Q16787 3333 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 PLIN4Q96Q06 1357 aa12.69□□□□□ -0.38
PTP4A2-216ENST00000534796 SYNGAP1Q96PV0 1343 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 PRDM1O75626 825 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 ADCYAP1R1P41586 468 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 PPARAQ07869 468 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 SNX17Q15036 470 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 DEFB123Q8N688 67 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 CHST13Q8NET6 341 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 KIFC2Q96AC6 838 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 SLC38A10Q9HBR0 1119 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 PHF24Q9UPV7 400 aa12.68□□□□□ -0.38
PTP4A2-216ENST00000534796 FRMPD3Q5JV73 1810 aa12.67□□□□□ -0.38
PTP4A2-216ENST00000534796 GREB1LQ9C091 1923 aaPredicted RBP12.67□□□□□ -0.38
PTP4A2-216ENST00000534796 BMP3P12645 472 aa12.67□□□□□ -0.38
PTP4A2-216ENST00000534796 RRP1P56182 461 aaKnown RBP12.67□□□□□ -0.38
PTP4A2-216ENST00000534796 TFAP4Q01664 338 aa12.67□□□□□ -0.38
PTP4A2-216ENST00000534796 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms