RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 SNRNP48Q6IEG0 339 aaKnown RBP25.54■■□□□ 1.68
SSH3-211ENST00000534112 STK11IPQ8N1F8 1099 aa25.54■■□□□ 1.68
SSH3-211ENST00000534112 MAFAQ8NHW3 353 aaPredicted RBP25.54■■□□□ 1.68
SSH3-211ENST00000534112 DDX11Q96FC9 970 aa25.54■■□□□ 1.68
SSH3-211ENST00000534112 RNPC3Q96LT9 517 aaKnown RBP25.54■■□□□ 1.68
SSH3-211ENST00000534112 MKNK2Q9HBH9 465 aa25.54■■□□□ 1.68
SSH3-211ENST00000534112 TMEM39AQ9NV64 488 aa25.54■■□□□ 1.68
SSH3-211ENST00000534112 RIPK3Q9Y572 518 aa25.54■■□□□ 1.68
SSH3-211ENST00000534112 ZNFX1Q9P2E3 1918 aaKnown RBP25.53■■□□□ 1.68
SSH3-211ENST00000534112 GSG1L2A8MUP6 293 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 SNAI1O95863 264 aaPredicted RBP25.53■■□□□ 1.68
SSH3-211ENST00000534112 NDUFB10O96000 172 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 ACLYP53396 1101 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 GIMAP6Q6P9H5 292 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 ANKRD33Q7Z3H0 272 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 PRPF38AQ8NAV1 312 aaKnown RBP25.53■■□□□ 1.68
SSH3-211ENST00000534112 MYLIPQ8WY64 445 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 TOX2Q96NM4 488 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 FAM184BQ9ULE4 1060 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 SYNGAP1Q96PV0 1343 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 PARP14Q460N5 1801 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 MYH8P13535 1937 aa25.53■■□□□ 1.68
SSH3-211ENST00000534112 DNAJC25-GNG10A0A024R161 153 aa25.52■■□□□ 1.68
SSH3-211ENST00000534112 MINDY4BA8MYZ0 360 aa25.52■■□□□ 1.68
SSH3-211ENST00000534112 FAAP100Q0VG06 881 aa25.52■■□□□ 1.68
SSH3-211ENST00000534112 MAMDC4Q6UXC1 1216 aa25.52■■□□□ 1.68
SSH3-211ENST00000534112 KLHDC9Q8NEP7 349 aa25.52■■□□□ 1.68
SSH3-211ENST00000534112 NUP133Q8WUM0 1156 aa25.52■■□□□ 1.68
SSH3-211ENST00000534112 STARD7Q9NQZ5 370 aa25.52■■□□□ 1.68
SSH3-211ENST00000534112 OSBP2Q969R2 916 aa25.51■■□□□ 1.67
SSH3-211ENST00000534112 ECHDC1Q9NTX5 307 aa25.51■■□□□ 1.67
SSH3-211ENST00000534112 CLIP2Q9UDT6 1046 aa25.51■■□□□ 1.67
SSH3-211ENST00000534112 SYNRGQ9UMZ2 1314 aa25.51■■□□□ 1.67
SSH3-211ENST00000534112 COL11A1P12107 1806 aaPredicted RBP25.51■■□□□ 1.67
SSH3-211ENST00000534112 MOXD2PA6NHM9 499 aa25.5■■□□□ 1.67
SSH3-211ENST00000534112 DCDC2CA8MYV0 355 aa25.5■■□□□ 1.67
SSH3-211ENST00000534112 ATP2A1O14983 1001 aa25.5■■□□□ 1.67
SSH3-211ENST00000534112 ZBED4O75132 1171 aa25.5■■□□□ 1.67
SSH3-211ENST00000534112 SLC4A3P48751 1232 aa25.5■■□□□ 1.67
SSH3-211ENST00000534112 FPGSQ05932 587 aa25.5■■□□□ 1.67
SSH3-211ENST00000534112 KCNA10Q16322 511 aa25.5■■□□□ 1.67
SSH3-211ENST00000534112 CCSAPQ6IQ19 270 aaPredicted RBP25.5■■□□□ 1.67
SSH3-211ENST00000534112 CPXCR1Q8N123 301 aa25.5■■□□□ 1.67
SSH3-211ENST00000534112 ZHX1Q9UKY1 873 aaPredicted RBP25.5■■□□□ 1.67
SSH3-211ENST00000534112 DUSP11O75319 330 aaKnown RBP25.49■■□□□ 1.67
SSH3-211ENST00000534112 ZNF467Q7Z7K2 595 aaPredicted RBP25.49■■□□□ 1.67
SSH3-211ENST00000534112 KBTBD3Q8NAB2 608 aa25.49■■□□□ 1.67
SSH3-211ENST00000534112 TMEM265A0A087WTH1 108 aa25.48■■□□□ 1.67
SSH3-211ENST00000534112 IGKV6D-41A0A0C4DH26 115 aa25.48■■□□□ 1.67
SSH3-211ENST00000534112 FOSL2P15408 326 aa25.48■■□□□ 1.67
SSH3-211ENST00000534112 APPBP2Q92624 585 aa25.48■■□□□ 1.67
SSH3-211ENST00000534112 KIFC2Q96AC6 838 aa25.48■■□□□ 1.67
SSH3-211ENST00000534112 RAVER2Q9HCJ3 691 aaKnown RBP25.48■■□□□ 1.67
SSH3-211ENST00000534112 CTDP1Q9Y5B0 961 aaPredicted RBP25.48■■□□□ 1.67
SSH3-211ENST00000534112 MYADML2A6NDP7 307 aa25.47■■□□□ 1.67
SSH3-211ENST00000534112 ACVR2BQ13705 512 aa25.47■■□□□ 1.67
SSH3-211ENST00000534112 ZNF444Q8N0Y2 327 aaPredicted RBP25.47■■□□□ 1.67
SSH3-211ENST00000534112 MKL1Q969V6 931 aa25.47■■□□□ 1.67
SSH3-211ENST00000534112 SLC38A10Q9HBR0 1119 aa25.47■■□□□ 1.67
SSH3-211ENST00000534112 SPTBN5Q9NRC6 3674 aaKnown RBP25.47■■□□□ 1.67
SSH3-211ENST00000534112 RNF113AO15541 343 aaKnown RBP25.46■■□□□ 1.67
SSH3-211ENST00000534112 TIMP1P01033 207 aa25.46■■□□□ 1.67
SSH3-211ENST00000534112 IRX5P78411 483 aaPredicted RBP25.46■■□□□ 1.67
SSH3-211ENST00000534112 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.46■■□□□ 1.67
SSH3-211ENST00000534112 ANKRD35Q8N283 1001 aa25.46■■□□□ 1.67
SSH3-211ENST00000534112 CEP95Q96GE4 821 aa25.46■■□□□ 1.67
SSH3-211ENST00000534112 GLT1D1Q96MS3 346 aa25.46■■□□□ 1.67
SSH3-211ENST00000534112 EPB41L4AQ9HCS5 686 aaPredicted RBP25.46■■□□□ 1.67
SSH3-211ENST00000534112 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.46■■□□□ 1.67
SSH3-211ENST00000534112 FEM1BQ9UK73 627 aa25.46■■□□□ 1.67
SSH3-211ENST00000534112 TBX21Q9UL17 535 aa25.46■■□□□ 1.67
SSH3-211ENST00000534112 ELP1O95163 1332 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.45■■□□□ 1.66
SSH3-211ENST00000534112 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.45■■□□□ 1.66
SSH3-211ENST00000534112 GPAA1O43292 621 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 PRDM1O75626 825 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 C6orf222P0C671 652 aaPredicted RBP25.45■■□□□ 1.66
SSH3-211ENST00000534112 CST5P28325 142 aaPredicted RBP25.45■■□□□ 1.66
SSH3-211ENST00000534112 DIEXFQ68CQ4 756 aaKnown RBP25.45■■□□□ 1.66
SSH3-211ENST00000534112 FGD4Q96M96 766 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 ABHD16BQ9H3Z7 469 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 ZNF287Q9HBT7 754 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 MTMR4Q9NYA4 1195 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 RCAN3Q9UKA8 241 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 PLXNA1Q9UIW2 1896 aa25.45■■□□□ 1.66
SSH3-211ENST00000534112 ADCY6O43306 1168 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 GNAT2P19087 354 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 TDO2P48775 406 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 CDK7P50613 346 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 CCDC144BQ3MJ40 725 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 C20orf194Q5TEA3 1177 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 PCSK9Q8NBP7 692 aaKnown RBP25.44■■□□□ 1.66
SSH3-211ENST00000534112 CHST13Q8NET6 341 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 SPC25Q9HBM1 224 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 FBXO40Q9UH90 709 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 SYNPO2Q9UMS6 1093 aa25.44■■□□□ 1.66
SSH3-211ENST00000534112 GREB1LQ9C091 1923 aaPredicted RBP25.43■■□□□ 1.66
SSH3-211ENST00000534112 TTLL1O95922 423 aa25.43■■□□□ 1.66
SSH3-211ENST00000534112 APPP05067 770 aa25.43■■□□□ 1.66
SSH3-211ENST00000534112 ASGR1P07306 291 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms