RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 KLF18A0A0U1RQI7 1052 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 GOLGA8BA8MQT2 603 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 FOXN1O15353 648 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 ZBTB43O43298 467 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 FKTNO75072 461 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 COPB2P35606 906 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 SP3Q02447 781 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 TROAPQ12815 778 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 GRM4Q14833 912 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 PPP2R5BQ15173 497 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 SYDE2Q5VT97 1194 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 APOA5Q6Q788 366 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 C17orf99Q6UX52 265 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 ANKRD13CQ8N6S4 541 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 GPRC5AQ8NFJ5 357 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 ATG4CQ96DT6 458 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 ERO1AQ96HE7 468 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 LZTS2Q9BRK4 669 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 GPHNQ9NQX3 736 aaPredicted RBP13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 FBXO28Q9NVF7 368 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 MORF4L1Q9UBU8 362 aa13.79□□□□□ -0.2
PPFIA1-220ENST00000532024 A0A0G2JMZ2 1700 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 CCDC196A0A1B0GTZ2 297 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 VWA5AO00534 786 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 BCRP11274 1271 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 NEK4P51957 841 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 ERVK-9P63128 1117 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 ERVK-24P63145 666 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 PLS1Q14651 629 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 RABEP1Q15276 862 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 BTNL9Q6UXG8 535 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 TBC1D32Q96NH3 1257 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 AGXT2Q9BYV1 514 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 SENP2Q9HC62 589 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 RBM28Q9NW13 759 aaKnown RBP13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 TSKSQ9UJT2 592 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 PARP14Q460N5 1801 aa13.78□□□□□ -0.2
PPFIA1-220ENST00000532024 GOLGA8AA7E2F4 631 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 GOLGA8HP0CJ92 632 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 HSPA8P11142 646 aaKnown RBP13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 OAZ1P54368 228 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 FCGRTP55899 365 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 APOBRQ0VD83 1088 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 TRAF1Q13077 416 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 COL9A3Q14050 684 aaPredicted RBP13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 RASGRP2Q7LDG7 609 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 FANCBQ8NB91 859 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 TEX13BQ9BXU2 312 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 RBPJLQ9UBG7 517 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 PRR12Q9ULL5 1215 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 ADAMTS5Q9UNA0 930 aa13.77□□□□□ -0.21
PPFIA1-220ENST00000532024 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 ST18O60284 1047 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 SLC25A27O95847 323 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 GNRH1P01148 92 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 MAPK4P31152 587 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 SLC16A2P36021 539 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 METAP2P50579 478 aaKnown RBP eCLIP13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 LBX1P52954 281 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 LACTBP83111 547 aaPredicted RBP13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 RTN1Q16799 776 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 ZNF296Q8WUU4 475 aaPredicted RBP13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 MYL10Q9BUA6 226 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 SPATC1LQ9H0A9 340 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 R3HDMLQ9H3Y0 253 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 SLC38A10Q9HBR0 1119 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 MAD2L2Q9UI95 211 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 RLFQ13129 1914 aa13.76□□□□□ -0.21
PPFIA1-220ENST00000532024 ATP2A1O14983 1001 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 SMARCA1P28370 1054 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 STAT3P40763 770 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 WDR78Q5VTH9 848 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 TTBK2Q6IQ55 1244 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 CPLX2Q6PUV4 134 aaKnown RBP13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 CCDC144CPQ8IYA2 1237 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 SHCBP1Q8NEM2 672 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 COA7Q96BR5 231 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 ZNF274Q96GC6 653 aaPredicted RBP13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 RANBP17Q9H2T7 1088 aaKnown RBP13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 MROH8Q9H579 483 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 BTBD7Q9P203 1132 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 SEC63Q9UGP8 760 aaKnown RBP13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 BRPF3Q9ULD4 1205 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
PPFIA1-220ENST00000532024 NID2Q14112 1375 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 TNPO2O14787 897 aaKnown RBP13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 FMNL1O95466 1100 aaPredicted RBP13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 RXRAP19793 462 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 HOXD10P28358 340 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 AK2P54819 239 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 EVCP57679 992 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 TOB2Q14106 344 aaPredicted RBP13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 TMEM132BQ14DG7 1078 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 TKFCQ3LXA3 575 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 RIOX2Q8IUF8 465 aa13.74□□□□□ -0.21
PPFIA1-220ENST00000532024 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms