RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 SLC12A4Q9UP95 1085 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 TOPAZ1Q8N9V7 1692 aa8.66□□□□□ -1.02
PTPRK-219ENST00000531050 ZNF185O15231 689 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 SPTLC2O15270 562 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 EVI5O60447 810 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 LGR5O75473 907 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 CCND1P24385 295 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 IL13P35225 146 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 PBX1P40424 430 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 CCDC15Q0P6D6 951 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 LBRQ14739 615 aaKnown RBP8.65□□□□□ -1.02
PTPRK-219ENST00000531050 SGSM1Q2NKQ1 1148 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 Q4G0T1 1027 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 APTXQ7Z2E3 356 aaKnown RBP8.65□□□□□ -1.02
PTPRK-219ENST00000531050 PPFIBP1Q86W92 1011 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 CD302Q8IX05 232 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 ELOA2Q8IYF1 753 aaPredicted RBP8.65□□□□□ -1.02
PTPRK-219ENST00000531050 MMGT1Q8N4V1 131 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 C1orf131Q8NDD1 294 aaKnown RBP8.65□□□□□ -1.02
PTPRK-219ENST00000531050 RUBCNQ92622 972 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 NAF1Q96HR8 494 aaKnown RBP8.65□□□□□ -1.02
PTPRK-219ENST00000531050 ATP6V1G3Q96LB4 118 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 FAM227BQ96M60 508 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 MED15Q96RN5 788 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 MTRQ99707 1265 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 GALNT8Q9NY28 637 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 REXO2Q9Y3B8 237 aaKnown RBP8.65□□□□□ -1.02
PTPRK-219ENST00000531050 PTPDC1A2A3K4 754 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 CCT8L1PA6NM43 557 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 BACH1O14867 736 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 ZNF189O75820 626 aaPredicted RBP8.65□□□□□ -1.02
PTPRK-219ENST00000531050 YEATS4O95619 227 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 GSTA1P08263 222 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 TBC1D1Q86TI0 1168 aaPredicted RBP8.65□□□□□ -1.02
PTPRK-219ENST00000531050 ARL10Q8N8L6 244 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 SSH3Q8TE77 659 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 C17orf50Q8WW18 174 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 SLC35B4Q969S0 331 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 JAKMIP2Q96AA8 810 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 LRRC1Q9BTT6 524 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 SNRKQ9NRH2 765 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 ZRANB1Q9UGI0 708 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 ZMYM6O95789 1325 aa8.65□□□□□ -1.02
PTPRK-219ENST00000531050 GLRX3O76003 335 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 TRIM37O94972 964 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 CASP14P31944 242 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 KIF5BP33176 963 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 FXR1P51114 621 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 MRPS25P82663 173 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 PABPC4Q13310 644 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 TAF11Q15544 211 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 GALNT17Q6IS24 598 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 MAEAQ7L5Y9 396 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 ARMC9Q7Z3E5 817 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 METTL16Q86W50 562 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 TMTC1Q8IUR5 882 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 MLKLQ8NB16 471 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 IFT43Q96FT9 208 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 AGAP3Q96P47 875 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 SLF1Q9BQI6 1058 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 SAMSN1Q9NSI8 373 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 SLC12A6Q9UHW9 1150 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 GUCA1BQ9UMX6 200 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 SBNO1A3KN83 1393 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 CFAP73A6NFT4 308 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 HMGB1P1B2RPK0 211 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 CHL1O00533 1208 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 SURF6O75683 361 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 MBD4O95243 580 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 PENKP01210 267 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 GYPCP04921 128 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 PSMC4P43686 418 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 MRPS35P82673 323 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 NMIQ13287 307 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 HSP90AB4PQ58FF6 505 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 CFAP58Q5T655 872 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 TXNDC2Q86VQ3 553 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 FAM114A1Q8IWE2 563 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 TRMT44Q8IYL2 757 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 CAGE1Q8TC20 777 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 ENOX1Q8TC92 643 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 PRCCQ92733 491 aaPredicted RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 KCNN1Q92952 543 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 NUDT16Q96DE0 195 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 CCDC51Q96ER9 411 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 CCDC43Q96MW1 224 aaKnown RBP8.64□□□□□ -1.03
PTPRK-219ENST00000531050 ATXN10Q9UBB4 475 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 WWC3Q9ULE0 1092 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 HPSEQ9Y251 543 aa8.64□□□□□ -1.03
PTPRK-219ENST00000531050 TMEM221A6NGB7 291 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 F8W031 263 aaPredicted RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 SASH1O94885 1247 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 PARP1P09874 1014 aaKnown RBP8.63□□□□□ -1.03
PTPRK-219ENST00000531050 DRD4P21917 467 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 TNFRSF8P28908 595 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 STAT6P42226 847 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 SYKP43405 635 aa8.63□□□□□ -1.03
PTPRK-219ENST00000531050 GJA8P48165 433 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms