RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 DDX11L8A8MPP1 907 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 SPTLC1O15269 473 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 PCP11498 1178 aaKnown RBP12.97□□□□□ -0.33
CCDC84-205ENST00000528088 PTPREP23469 700 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 DNAJB2P25686 324 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 TREML2Q5T2D2 321 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 RNF20Q5VTR2 975 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 RALYLQ86SE5 291 aaKnown RBP12.97□□□□□ -0.33
CCDC84-205ENST00000528088 ESR2Q92731 530 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 MAP4K1Q92918 833 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 TATDN2Q93075 761 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 WDR18Q9BV38 432 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 KANSL2Q9H9L4 492 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 ISY1Q9ULR0 285 aaKnown RBP12.97□□□□□ -0.33
CCDC84-205ENST00000528088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC84-205ENST00000528088 GREB1LQ9C091 1923 aaPredicted RBP12.97□□□□□ -0.33
CCDC84-205ENST00000528088 NEDD4P46934 1319 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 B4E1Z4 1266 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 ORC4O43929 436 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 CYP21A2P08686 494 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 BCRP11274 1271 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 GUCY1A2P33402 732 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 USP14P54578 494 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 BACE1P56817 501 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 TUSC1Q2TAM9 212 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 TMEM259Q4ZIN3 620 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 TRIM47Q96LD4 638 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 PARK7Q99497 189 aaKnown RBP12.97□□□□□ -0.33
CCDC84-205ENST00000528088 KRT23Q9C075 422 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 CNNM2Q9H8M5 875 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 PNMA3Q9UL41 463 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 STX8Q9UNK0 236 aa12.97□□□□□ -0.33
CCDC84-205ENST00000528088 LOC285556D6RIA3 1793 aa12.96□□□□□ -0.33
CCDC84-205ENST00000528088 MOXD2PA6NHM9 499 aa12.96□□□□□ -0.34
CCDC84-205ENST00000528088 C19orf81C9J6K1 198 aa12.96□□□□□ -0.34
CCDC84-205ENST00000528088 KDM4AO75164 1064 aa12.96□□□□□ -0.34
CCDC84-205ENST00000528088 EEF2P13639 858 aaKnown RBP12.96□□□□□ -0.34
CCDC84-205ENST00000528088 PSMC4P43686 418 aa12.96□□□□□ -0.34
CCDC84-205ENST00000528088 NEDD1Q8NHV4 660 aa12.96□□□□□ -0.34
CCDC84-205ENST00000528088 ARMC5Q96C12 935 aa12.96□□□□□ -0.34
CCDC84-205ENST00000528088 CEP95Q96GE4 821 aa12.96□□□□□ -0.34
CCDC84-205ENST00000528088 TMEM134Q9H6X4 195 aa12.96□□□□□ -0.34
CCDC84-205ENST00000528088 SLC27A2O14975 620 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 TTLL1O95922 423 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 MYCP01106 439 aaPredicted RBP12.95□□□□□ -0.34
CCDC84-205ENST00000528088 ZKSCAN1P17029 563 aaPredicted RBP12.95□□□□□ -0.34
CCDC84-205ENST00000528088 MCCP23508 829 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 PABPC4Q13310 644 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC84-205ENST00000528088 KIF22Q14807 665 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 CREB3L3Q68CJ9 461 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 IQCA1Q86XH1 822 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 SH3TC2Q8TF17 1288 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 CLIP2Q9UDT6 1046 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 AGTPBP1Q9UPW5 1226 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 MTMR7Q9Y216 660 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 TACC3Q9Y6A5 838 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 CENPFP49454 3210 aa12.95□□□□□ -0.34
CCDC84-205ENST00000528088 KIAA0100Q14667 2235 aaKnown RBP12.94□□□□□ -0.34
CCDC84-205ENST00000528088 E7EWF7 191 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 NMT2O60551 498 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 EIF5BO60841 1220 aaKnown RBP12.94□□□□□ -0.34
CCDC84-205ENST00000528088 IRX3P78415 501 aaPredicted RBP12.94□□□□□ -0.34
CCDC84-205ENST00000528088 ARHGEF6Q15052 776 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 SPICE1Q8N0Z3 855 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 LRRC47Q8N1G4 583 aaKnown RBP12.94□□□□□ -0.34
CCDC84-205ENST00000528088 NCOA7Q8NI08 942 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 SMCR8Q8TEV9 937 aaPredicted RBP12.94□□□□□ -0.34
CCDC84-205ENST00000528088 CHMP4CQ96CF2 233 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 ZNF333Q96JL9 665 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 UBAC1Q9BSL1 405 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 KIAA1683Q9H0B3 1180 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 SLC45A1Q9Y2W3 748 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 PLIN4Q96Q06 1357 aa12.94□□□□□ -0.34
CCDC84-205ENST00000528088 A0A1W2PRG0 241 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 ERICH2A1L162 156 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 FMNL1O95466 1100 aaPredicted RBP12.93□□□□□ -0.34
CCDC84-205ENST00000528088 FGRP09769 529 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 NDUFV2P19404 249 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 EN2P19622 333 aaPredicted RBP12.93□□□□□ -0.34
CCDC84-205ENST00000528088 QPCTQ16769 361 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 CSPP1Q1MSJ5 1256 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 TANGO6Q9C0B7 1094 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 MTMR4Q9NYA4 1195 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 SRRDQ9UH36 339 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 TMX2Q9Y320 296 aa12.93□□□□□ -0.34
CCDC84-205ENST00000528088 SMAPO00193 183 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 PEX10O60683 326 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 VCAM1P19320 739 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 NT5C2P49902 561 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 PRKCZQ05513 592 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 SART3Q15020 963 aaKnown RBP12.92□□□□□ -0.34
CCDC84-205ENST00000528088 NECTIN1Q15223 517 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 SLC9C1Q4G0N8 1177 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 ANKRD13CQ8N6S4 541 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 VCPKMTQ9H867 229 aa12.92□□□□□ -0.34
CCDC84-205ENST00000528088 NYAP2Q9P242 653 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms