RNA–Protein interactions for RNA: ENST00000526919.5

UBXN1-207, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-207ENST00000526919 FAM122AQ96E09 287 aa19.41■□□□□ 0.7
UBXN1-207ENST00000526919 MROH7Q68CQ1 1323 aa19.41■□□□□ 0.7
UBXN1-207ENST00000526919 SMIM22K7EJ46 135 aa19.4■□□□□ 0.7
UBXN1-207ENST00000526919 DUSP11O75319 330 aaKnown RBP19.4■□□□□ 0.7
UBXN1-207ENST00000526919 LCORLQ8N3X6 602 aa19.4■□□□□ 0.7
UBXN1-207ENST00000526919 TMEM199Q8N511 208 aa19.4■□□□□ 0.7
UBXN1-207ENST00000526919 MSL3Q8N5Y2 521 aaKnown RBP19.4■□□□□ 0.7
UBXN1-207ENST00000526919 GLT1D1Q96MS3 346 aa19.4■□□□□ 0.7
UBXN1-207ENST00000526919 PPP1R9AQ9ULJ8 1098 aa19.4■□□□□ 0.7
UBXN1-207ENST00000526919 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
UBXN1-207ENST00000526919 TCRBV5S4A2TA0A5A2 114 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 ASGR1P07306 291 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 EEF2P13639 858 aaKnown RBP19.39■□□□□ 0.69
UBXN1-207ENST00000526919 CST5P28325 142 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-207ENST00000526919 COPB2P35606 906 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 TTF1Q15361 905 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-207ENST00000526919 MAMDC4Q6UXC1 1216 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 AACSQ86V21 672 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 VTI1AQ96AJ9 217 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 CCDC17Q96LX7 622 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 PPP1R12CQ9BZL4 782 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 NKX2-4Q9H2Z4 354 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 MSRAQ9UJ68 235 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 ZHX1Q9UKY1 873 aaPredicted RBP19.39■□□□□ 0.69
UBXN1-207ENST00000526919 SYNGAP1Q96PV0 1343 aa19.39■□□□□ 0.69
UBXN1-207ENST00000526919 ARVCFO00192 962 aa19.38■□□□□ 0.69
UBXN1-207ENST00000526919 ADCY6O43306 1168 aa19.38■□□□□ 0.69
UBXN1-207ENST00000526919 C6orf222P0C671 652 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-207ENST00000526919 CDK8P49336 464 aa19.38■□□□□ 0.69
UBXN1-207ENST00000526919 RAB30Q15771 203 aa19.38■□□□□ 0.69
UBXN1-207ENST00000526919 PSRC1Q6PGN9 363 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-207ENST00000526919 HERVK_113Q902F9 699 aa19.38■□□□□ 0.69
UBXN1-207ENST00000526919 ARMT1Q9H993 441 aa19.38■□□□□ 0.69
UBXN1-207ENST00000526919 CXXC1Q9P0U4 656 aaPredicted RBP19.38■□□□□ 0.69
UBXN1-207ENST00000526919 DNAJC25-GNG10A0A024R161 153 aa19.37■□□□□ 0.69
UBXN1-207ENST00000526919 A0A0U1RQG5 324 aaPredicted RBP19.37■□□□□ 0.69
UBXN1-207ENST00000526919 PRKAB2O43741 272 aa19.37■□□□□ 0.69
UBXN1-207ENST00000526919 FAM83BQ5T0W9 1011 aa19.37■□□□□ 0.69
UBXN1-207ENST00000526919 FAM126BQ8IXS8 530 aa19.37■□□□□ 0.69
UBXN1-207ENST00000526919 PCSK9Q8NBP7 692 aaKnown RBP19.37■□□□□ 0.69
UBXN1-207ENST00000526919 IL27Q8NEV9 243 aa19.37■□□□□ 0.69
UBXN1-207ENST00000526919 DDX11Q96FC9 970 aa19.37■□□□□ 0.69
UBXN1-207ENST00000526919 NECAB3Q96P71 396 aaPredicted RBP19.37■□□□□ 0.69
UBXN1-207ENST00000526919 IL23AQ9NPF7 189 aa19.37■□□□□ 0.69
UBXN1-207ENST00000526919 YBX2Q9Y2T7 364 aaKnown RBP19.37■□□□□ 0.69
UBXN1-207ENST00000526919 CYP2D7A0A087X1C5 515 aa19.36■□□□□ 0.69
UBXN1-207ENST00000526919 CYP2C18P33260 490 aa19.36■□□□□ 0.69
UBXN1-207ENST00000526919 ACVR2BQ13705 512 aa19.36■□□□□ 0.69
UBXN1-207ENST00000526919 UPF3AQ9H1J1 476 aaKnown RBP19.36■□□□□ 0.69
UBXN1-207ENST00000526919 KANSL2Q9H9L4 492 aa19.36■□□□□ 0.69
UBXN1-207ENST00000526919 SLC28A3Q9HAS3 691 aa19.36■□□□□ 0.69
UBXN1-207ENST00000526919 RIPK3Q9Y572 518 aa19.36■□□□□ 0.69
UBXN1-207ENST00000526919 APBB1O00213 710 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 TLR3O15455 904 aaKnown RBP19.35■□□□□ 0.69
UBXN1-207ENST00000526919 CD4P01730 458 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 BMP1P13497 986 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 GJA9P57773 515 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 GNASQ5JWF2 1037 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 C12orf60Q5U649 245 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 ZKSCAN2Q63HK3 967 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 GOPCQ9HD26 462 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 ATP8A2Q9NTI2 1148 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 EXOC6BQ9Y2D4 811 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 TRANK1O15050 2925 aa19.35■□□□□ 0.69
UBXN1-207ENST00000526919 GOLIM4O00461 696 aa19.34■□□□□ 0.69
UBXN1-207ENST00000526919 RAD21O60216 631 aa19.34■□□□□ 0.69
UBXN1-207ENST00000526919 FGBP02675 491 aa19.34■□□□□ 0.69
UBXN1-207ENST00000526919 CCDC144BQ3MJ40 725 aa19.34■□□□□ 0.69
UBXN1-207ENST00000526919 SLFNL1Q499Z3 407 aa19.34■□□□□ 0.69
UBXN1-207ENST00000526919 SNRNP48Q6IEG0 339 aaKnown RBP19.34■□□□□ 0.69
UBXN1-207ENST00000526919 C16orf86Q6ZW13 317 aa19.34■□□□□ 0.69
UBXN1-207ENST00000526919 ZNF467Q7Z7K2 595 aaPredicted RBP19.34■□□□□ 0.69
UBXN1-207ENST00000526919 TEX13BQ9BXU2 312 aa19.34■□□□□ 0.69
UBXN1-207ENST00000526919 SPC25Q9HBM1 224 aa19.34■□□□□ 0.69
UBXN1-207ENST00000526919 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
UBXN1-207ENST00000526919 GREB1LQ9C091 1923 aaPredicted RBP19.33■□□□□ 0.69
UBXN1-207ENST00000526919 USP17L12C9JPN9 530 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 USP17L21D6R901 530 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 CTAGE5O15320 804 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 HOXD11P31277 338 aaPredicted RBP19.33■□□□□ 0.68
UBXN1-207ENST00000526919 ERC1Q8IUD2 1116 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 FGD4Q96M96 766 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 NUP88Q99567 741 aaPredicted RBP19.33■□□□□ 0.68
UBXN1-207ENST00000526919 C1QTNF1Q9BXJ1 281 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 TSPYL2Q9H2G4 693 aaPredicted RBP19.33■□□□□ 0.68
UBXN1-207ENST00000526919 ABHD16BQ9H3Z7 469 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 IL1RAPL2Q9NP60 686 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 XIRP2A4UGR9 3374 aa19.33■□□□□ 0.68
UBXN1-207ENST00000526919 UMODL1Q5DID0 1318 aa19.32■□□□□ 0.68
UBXN1-207ENST00000526919 MYH7P12883 1935 aa19.32■□□□□ 0.68
UBXN1-207ENST00000526919 MBD4O95243 580 aa19.32■□□□□ 0.68
UBXN1-207ENST00000526919 SLC4A3P48751 1232 aa19.32■□□□□ 0.68
UBXN1-207ENST00000526919 TFF2Q03403 129 aa19.32■□□□□ 0.68
UBXN1-207ENST00000526919 OTOP2Q7RTS6 562 aa19.32■□□□□ 0.68
UBXN1-207ENST00000526919 DNAJC2Q99543 621 aaKnown RBP19.32■□□□□ 0.68
UBXN1-207ENST00000526919 SLF1Q9BQI6 1058 aa19.32■□□□□ 0.68
UBXN1-207ENST00000526919 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.32■□□□□ 0.68
UBXN1-207ENST00000526919 MTIF3Q9H2K0 278 aaKnown RBP19.32■□□□□ 0.68
UBXN1-207ENST00000526919 MYH4Q9Y623 1939 aa19.31■□□□□ 0.68
UBXN1-207ENST00000526919 RABGGTBP53611 331 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms