RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 STRNO43815 780 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 ADCY3O60266 1144 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 PLA2G6O60733 806 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 CAPN15O75808 1086 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 PDHBP11177 359 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 FCER1AP12319 257 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 ERCC3P19447 782 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 PSMA5P28066 241 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 GRK4P32298 578 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 KIF5BP33176 963 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 STAT3P40763 770 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 ZNF543Q08ER8 600 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 IRF5Q13568 498 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 NECTIN1Q15223 517 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 TKFCQ3LXA3 575 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 SYDE2Q5VT97 1194 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 SNRNP48Q6IEG0 339 aaKnown RBP6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 CYB5R4Q7L1T6 521 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 GPR142Q7Z601 462 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 DPP9Q86TI2 863 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 RIOX2Q8IUF8 465 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 CPXCR1Q8N123 301 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 CTCFLQ8NI51 663 aaPredicted RBP6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 ANKS1AQ92625 1134 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 NEK1Q96PY6 1258 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 MMP19Q99542 508 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 APBA2Q99767 749 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 TMEM106CQ9BVX2 250 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 MOV10L1Q9BXT6 1211 aaKnown RBP6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 PORCNQ9H237 461 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLC38A10Q9HBR0 1119 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 GPCPD1Q9NPB8 672 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 FBXO40Q9UH90 709 aa6.31□□□□□ -1.4
HMGB1P40-201ENST00000525121 WDR19Q8NEZ3 1342 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 ATP2A1O14983 1001 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 PEX10O60683 326 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CNMDO75829 334 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 DDAH1O94760 285 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 HMGCRP04035 888 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CALM1P0DP23 149 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CALM2P0DP24 149 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CALM3P0DP25 149 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 XRCC5P13010 732 aaKnown RBP6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CYP2B6P20813 491 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 PTPREP23469 700 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CTGFP29279 349 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 TRAF1Q13077 416 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 MAP2K5Q13163 448 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 MFSD14CQ5VZR4 134 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CCDC174Q6PII3 467 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 BLOC1S2Q6QNY1 142 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 STOX1Q6ZVD7 989 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CHST3Q7LGC8 479 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 MB21D2Q8IYB1 491 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 ABRAQ8N0Z2 381 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CHST13Q8NET6 341 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 PXYLP1Q8TE99 480 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 SH3TC2Q8TF17 1288 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 ARMC5Q96C12 935 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 DDX11Q96FC9 970 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 JAKMIP1Q96N16 626 aaKnown RBP6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 RAVER2Q9HCJ3 691 aaKnown RBP6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 HOMER2Q9NSB8 354 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 ZNF214Q9UL59 606 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CCPG1Q9ULG6 757 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 PRR12Q9ULL5 1215 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 GABRQQ9UN88 632 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 ADAMTS5Q9UNA0 930 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLC12A7Q9Y666 1083 aa6.3□□□□□ -1.4
HMGB1P40-201ENST00000525121 CASP8AP2Q9UKL3 1982 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 A0A0G2JMZ2 1700 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 KLRF2D3W0D1 207 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 INHAP05111 366 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 ICAM1P05362 532 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 GOLGA8HP0CJ92 632 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 SNHG28P0DPA3 235 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 ALAS1P13196 640 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 ELNP15502 786 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 ADORA2AP29274 412 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 HSPA4P34932 840 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 SLC16A2P36021 539 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 GNAQP50148 359 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 GRB14Q14449 540 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 SEC23AQ15436 765 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 Q3C1V9 767 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 TSGA10IPQ3SY00 556 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 MORN1Q5T089 497 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 BTNL9Q6UXG8 535 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 DHX32Q7L7V1 743 aaKnown RBP6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 ZNF654Q8IZM8 581 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 ANKRD35Q8N283 1001 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 NKX2-3Q8TAU0 364 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 NUP133Q8WUM0 1156 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 MPHOSPH6Q99547 160 aaKnown RBP6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 LZTS2Q9BRK4 669 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 RANBP17Q9H2T7 1088 aaKnown RBP6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 ACAD9Q9H845 621 aa6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 UPF2Q9HAU5 1272 aaKnown RBP6.29□□□□□ -1.4
HMGB1P40-201ENST00000525121 LY9Q9HBG7 655 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms