RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 DNAAF2Q9NVR5 837 aaKnown RBP13.4□□□□□ -0.27
SPIDR-217ENST00000522117 ASB3Q9Y575 518 aa13.4□□□□□ -0.27
SPIDR-217ENST00000522117 CARMIL3Q8ND23 1372 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 CRB1P82279 1406 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 RBM47A0AV96 593 aaKnown RBP13.39□□□□□ -0.27
SPIDR-217ENST00000522117 PDLIM1O00151 329 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 FDPSP14324 419 aaKnown RBP13.39□□□□□ -0.27
SPIDR-217ENST00000522117 SHC4Q6S5L8 630 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 C8orf76Q96K31 380 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 TSPYL2Q9H2G4 693 aaPredicted RBP13.39□□□□□ -0.27
SPIDR-217ENST00000522117 NCOA5Q9HCD5 579 aaKnown RBP13.39□□□□□ -0.27
SPIDR-217ENST00000522117 PCMTD2Q9NV79 361 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 WDR35Q9P2L0 1181 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 AMOTL2Q9Y2J4 779 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 TECPR2O15040 1411 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 N4BP2Q86UW6 1770 aaPredicted RBP13.39□□□□□ -0.27
SPIDR-217ENST00000522117 SPDYE5A6NIY4 337 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 HIP1O00291 1037 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 CD302Q8IX05 232 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 PHC3Q8NDX5 983 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 CAGE1Q8TC20 777 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 TEKT4Q8WW24 435 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 ATP6V1G3Q96LB4 118 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 YIPF2Q9BWQ6 316 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 MAN1B1Q9UKM7 699 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 SH3TC1Q8TE82 1336 aa13.39□□□□□ -0.27
SPIDR-217ENST00000522117 FAM237AA0A1B0GTK4 181 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 RASSF10A6NK89 507 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 STXBP3O00186 592 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 FOXN1O15353 648 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 MAGEA10P43363 369 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 CCDC15Q0P6D6 951 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 ANO1Q5XXA6 986 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 CNGA4Q8IV77 575 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 TRIM42Q8IWZ5 723 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 CACNA2D3Q8IZS8 1091 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 PRR36Q9H6K5 1346 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 ANKARQ7Z5J8 1434 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 EIF4E1BA6NMX2 242 aaKnown RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 RNF225M0QZC1 329 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 TAF5LO75529 589 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 LUC7L3O95232 432 aaKnown RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 NPTXRO95502 500 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 CLTAP09496 248 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 TUBP50607 506 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 MDM2Q00987 491 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 SLC9C2Q5TAH2 1124 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 THEMISQ8N1K5 641 aaPredicted RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 CCDC63Q8NA47 563 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 C1orf131Q8NDD1 294 aaKnown RBP13.38□□□□□ -0.27
SPIDR-217ENST00000522117 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 C2CD2Q9Y426 696 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 UBN2Q6ZU65 1347 aa13.38□□□□□ -0.27
SPIDR-217ENST00000522117 SLC7A5Q01650 507 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 MYBPC3Q14896 1274 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 CCDC43Q96MW1 224 aaKnown RBP13.37□□□□□ -0.27
SPIDR-217ENST00000522117 UBE2OQ9C0C9 1292 aaKnown RBP13.37□□□□□ -0.27
SPIDR-217ENST00000522117 ADD3Q9UEY8 706 aaKnown RBP13.37□□□□□ -0.27
SPIDR-217ENST00000522117 SUN2Q9UH99 717 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 EID1Q9Y6B2 187 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 KCNA6P17658 529 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 ZNF268Q14587 947 aaPredicted RBP13.37□□□□□ -0.27
SPIDR-217ENST00000522117 CCDC57Q2TAC2 916 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 PUS10Q3MIT2 529 aaKnown RBP13.37□□□□□ -0.27
SPIDR-217ENST00000522117 CYP26C1Q6V0L0 522 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 ARL10Q8N8L6 244 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 BICD1Q96G01 975 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 COL15A1P39059 1388 aa13.37□□□□□ -0.27
SPIDR-217ENST00000522117 MARCH6O60337 910 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 TNFRSF8P28908 595 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 FKBP15Q5T1M5 1219 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 CFAP58Q5T655 872 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 CCDC70Q6NSX1 233 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 PNMA8AQ86V59 439 aaPredicted RBP13.36□□□□□ -0.27
SPIDR-217ENST00000522117 ABHD10Q9NUJ1 306 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 TFR2Q9UP52 801 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 SLC12A4Q9UP95 1085 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 HMGB1P1B2RPK0 211 aaPredicted RBP13.36□□□□□ -0.27
SPIDR-217ENST00000522117 KIF28PB7ZC32 967 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 WASLO00401 505 aaPredicted RBP13.36□□□□□ -0.27
SPIDR-217ENST00000522117 BACH1O14867 736 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 N4BP3O15049 544 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 ALDH3A1P30838 453 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 GNAQP50148 359 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 CCNG1P51959 295 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 SLC39A14Q15043 492 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 ZNF827Q17R98 1081 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 TEX9Q8N6V9 391 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 SLC12A6Q9UHW9 1150 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 TOPAZ1Q8N9V7 1692 aa13.36□□□□□ -0.27
SPIDR-217ENST00000522117 CNGA1P29973 690 aa13.35□□□□□ -0.27
SPIDR-217ENST00000522117 MXRA7P84157 204 aa13.35□□□□□ -0.27
SPIDR-217ENST00000522117 ANKRD20A2Q5SQ80 823 aa13.35□□□□□ -0.27
SPIDR-217ENST00000522117 ACBD5Q5T8D3 534 aaPredicted RBP13.35□□□□□ -0.27
SPIDR-217ENST00000522117 ANKRD20A1Q5TYW2 823 aa13.35□□□□□ -0.27
SPIDR-217ENST00000522117 ANKRD20A3Q5VUR7 823 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms