RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 GUCD1Q96NT3 240 aa21.56■■□□□ 1.04
TFF3-204ENST00000518498 PHF24Q9UPV7 400 aa21.56■■□□□ 1.04
TFF3-204ENST00000518498 BAZ2AQ9UIF9 1905 aaKnown RBP21.55■■□□□ 1.04
TFF3-204ENST00000518498 KBTBD3Q8NAB2 608 aa21.55■■□□□ 1.04
TFF3-204ENST00000518498 FSD1Q9BTV5 496 aa21.55■■□□□ 1.04
TFF3-204ENST00000518498 ARPP21Q9UBL0 812 aaPredicted RBP21.55■■□□□ 1.04
TFF3-204ENST00000518498 DNAH12Q6ZR08 3092 aa21.54■■□□□ 1.04
TFF3-204ENST00000518498 TRIM43BA6NCK2 446 aa21.54■■□□□ 1.04
TFF3-204ENST00000518498 TLE2Q04725 743 aa21.54■■□□□ 1.04
TFF3-204ENST00000518498 C9orf50Q5SZB4 431 aa21.54■■□□□ 1.04
TFF3-204ENST00000518498 SH3RF1Q7Z6J0 888 aa21.54■■□□□ 1.04
TFF3-204ENST00000518498 TRIM43Q96BQ3 446 aaPredicted RBP21.54■■□□□ 1.04
TFF3-204ENST00000518498 STRBPQ96SI9 672 aaKnown RBP21.54■■□□□ 1.04
TFF3-204ENST00000518498 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.54■■□□□ 1.04
TFF3-204ENST00000518498 PDLIM7Q9NR12 457 aa21.54■■□□□ 1.04
TFF3-204ENST00000518498 ZNF214Q9UL59 606 aaPredicted RBP21.54■■□□□ 1.04
TFF3-204ENST00000518498 TACC3Q9Y6A5 838 aa21.54■■□□□ 1.04
TFF3-204ENST00000518498 ZNFX1Q9P2E3 1918 aaKnown RBP21.54■■□□□ 1.04
TFF3-204ENST00000518498 PGK1P00558 417 aa21.53■■□□□ 1.04
TFF3-204ENST00000518498 TAL1P17542 331 aaPredicted RBP21.53■■□□□ 1.04
TFF3-204ENST00000518498 SBK1Q52WX2 424 aa21.53■■□□□ 1.04
TFF3-204ENST00000518498 REPS2Q8NFH8 660 aa21.53■■□□□ 1.04
TFF3-204ENST00000518498 MKNK2Q9HBH9 465 aa21.53■■□□□ 1.04
TFF3-204ENST00000518498 ZNF865P0CJ78 1059 aaPredicted RBP21.52■■□□□ 1.04
TFF3-204ENST00000518498 AKR1A1P14550 325 aa21.52■■□□□ 1.04
TFF3-204ENST00000518498 STK11IPQ8N1F8 1099 aa21.52■■□□□ 1.04
TFF3-204ENST00000518498 SLF1Q9BQI6 1058 aa21.52■■□□□ 1.04
TFF3-204ENST00000518498 NYAP2Q9P242 653 aa21.52■■□□□ 1.04
TFF3-204ENST00000518498 CNPY2Q9Y2B0 182 aa21.52■■□□□ 1.04
TFF3-204ENST00000518498 LTBP2Q14767 1821 aa21.52■■□□□ 1.04
TFF3-204ENST00000518498 PARP14Q460N5 1801 aa21.52■■□□□ 1.04
TFF3-204ENST00000518498 MINDY4BA8MYZ0 360 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 F5H6K3 240 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 ZFYP08048 801 aaPredicted RBP21.51■■□□□ 1.03
TFF3-204ENST00000518498 RASA1P20936 1047 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 KLRC3Q07444 240 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 GIMAP6Q6P9H5 292 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.51■■□□□ 1.03
TFF3-204ENST00000518498 PRPF38AQ8NAV1 312 aaKnown RBP21.51■■□□□ 1.03
TFF3-204ENST00000518498 RUFY2Q8WXA3 655 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 DDX11Q96FC9 970 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 SEMA6BQ9H3T3 888 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 DIAPH3Q9NSV4 1193 aa21.51■■□□□ 1.03
TFF3-204ENST00000518498 COL11A1P12107 1806 aaPredicted RBP21.5■■□□□ 1.03
TFF3-204ENST00000518498 GSG1L2A8MUP6 293 aa21.5■■□□□ 1.03
TFF3-204ENST00000518498 CLTBP09497 229 aa21.5■■□□□ 1.03
TFF3-204ENST00000518498 SMAD3P84022 425 aaKnown RBP21.5■■□□□ 1.03
TFF3-204ENST00000518498 MSL3Q8N5Y2 521 aaKnown RBP21.5■■□□□ 1.03
TFF3-204ENST00000518498 NUP88Q99567 741 aaPredicted RBP21.5■■□□□ 1.03
TFF3-204ENST00000518498 TSEN34Q9BSV6 310 aaKnown RBP21.5■■□□□ 1.03
TFF3-204ENST00000518498 TEX13BQ9BXU2 312 aa21.5■■□□□ 1.03
TFF3-204ENST00000518498 A0A1W2PQ45 241 aaPredicted RBP21.49■■□□□ 1.03
TFF3-204ENST00000518498 A0A1W2PQY0 241 aa21.49■■□□□ 1.03
TFF3-204ENST00000518498 CHMLP26374 656 aa21.49■■□□□ 1.03
TFF3-204ENST00000518498 SLC4A3P48751 1232 aa21.49■■□□□ 1.03
TFF3-204ENST00000518498 C8orf34Q49A92 452 aa21.49■■□□□ 1.03
TFF3-204ENST00000518498 SNRNP48Q6IEG0 339 aaKnown RBP21.49■■□□□ 1.03
TFF3-204ENST00000518498 ZNF444Q8N0Y2 327 aaPredicted RBP21.49■■□□□ 1.03
TFF3-204ENST00000518498 CDX2Q99626 313 aaPredicted RBP21.49■■□□□ 1.03
TFF3-204ENST00000518498 CLIP2Q9UDT6 1046 aa21.49■■□□□ 1.03
TFF3-204ENST00000518498 FAM184BQ9ULE4 1060 aa21.49■■□□□ 1.03
TFF3-204ENST00000518498 CTDP1Q9Y5B0 961 aaPredicted RBP21.49■■□□□ 1.03
TFF3-204ENST00000518498 ZBED4O75132 1171 aa21.48■■□□□ 1.03
TFF3-204ENST00000518498 RAG1P15918 1043 aa21.48■■□□□ 1.03
TFF3-204ENST00000518498 ITGB8P26012 769 aa21.48■■□□□ 1.03
TFF3-204ENST00000518498 CPXCR1Q8N123 301 aa21.48■■□□□ 1.03
TFF3-204ENST00000518498 RIPK3Q9Y572 518 aa21.48■■□□□ 1.03
TFF3-204ENST00000518498 SMCHD1A6NHR9 2005 aa21.48■■□□□ 1.03
TFF3-204ENST00000518498 KIAA0355O15063 1070 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 RNF113AO15541 343 aaKnown RBP21.47■■□□□ 1.03
TFF3-204ENST00000518498 PQBP1O60828 265 aaKnown RBP21.47■■□□□ 1.03
TFF3-204ENST00000518498 ADAMTS4O75173 837 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 NDUFB10O96000 172 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 ACLYP53396 1101 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 MAMDC4Q6UXC1 1216 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 NUP133Q8WUM0 1156 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 APPBP2Q92624 585 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 OSBP2Q969R2 916 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 COL25A1Q9BXS0 654 aaPredicted RBP21.47■■□□□ 1.03
TFF3-204ENST00000518498 BACH2Q9BYV9 841 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 ZNF287Q9HBT7 754 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 TMEM39AQ9NV64 488 aa21.47■■□□□ 1.03
TFF3-204ENST00000518498 PLXNA1Q9UIW2 1896 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 DNAJC25-GNG10A0A024R161 153 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 ATP2A1O14983 1001 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 SNAI1O95863 264 aaPredicted RBP21.46■■□□□ 1.03
TFF3-204ENST00000518498 MKL1Q969V6 931 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 LENG1Q96BZ8 264 aaPredicted RBP21.46■■□□□ 1.03
TFF3-204ENST00000518498 TOX2Q96NM4 488 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 STARD7Q9NQZ5 370 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 RAD50Q92878 1312 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 SYNGAP1Q96PV0 1343 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 ROBO3Q96MS0 1386 aa21.46■■□□□ 1.03
TFF3-204ENST00000518498 MOXD2PA6NHM9 499 aa21.45■■□□□ 1.02
TFF3-204ENST00000518498 DCDC2CA8MYV0 355 aa21.45■■□□□ 1.02
TFF3-204ENST00000518498 APPP05067 770 aa21.45■■□□□ 1.02
TFF3-204ENST00000518498 GNAT2P19087 354 aa21.45■■□□□ 1.02
TFF3-204ENST00000518498 KCNA10Q16322 511 aa21.45■■□□□ 1.02
TFF3-204ENST00000518498 ANKRD33Q7Z3H0 272 aa21.45■■□□□ 1.02
TFF3-204ENST00000518498 ZNF467Q7Z7K2 595 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms