RNA–Protein interactions for RNA: ENST00000517940.1

AP3B1-203, Transcript of adaptor related protein complex 3 subunit beta 1, humanhuman

TSL 2

Gene AP3B1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1-203ENST00000517940 UPF2Q9HAU5 1272 aaKnown RBP13.82□□□□□ -0.2
AP3B1-203ENST00000517940 NCOA5Q9HCD5 579 aaKnown RBP13.82□□□□□ -0.2
AP3B1-203ENST00000517940 RBPJLQ9UBG7 517 aa13.82□□□□□ -0.2
AP3B1-203ENST00000517940 PRR12Q9ULL5 1215 aa13.82□□□□□ -0.2
AP3B1-203ENST00000517940 ZNF536O15090 1300 aa13.82□□□□□ -0.2
AP3B1-203ENST00000517940 LCTP09848 1927 aa13.82□□□□□ -0.2
AP3B1-203ENST00000517940 CCDC69A6NI79 296 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 GOLGA8BA8MQT2 603 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 TRPA1O75762 1119 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 FLOT1O75955 427 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 TBC1D8O95759 1140 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 CTGFP29279 349 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 NTRK3Q16288 839 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 Q3C1V9 767 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 ASPRV1Q53RT3 343 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 NFXL1Q6ZNB6 911 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 CATIPQ7Z7H3 387 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
AP3B1-203ENST00000517940 CMTR1Q8N1G2 835 aaKnown RBP13.81□□□□□ -0.2
AP3B1-203ENST00000517940 TMTC2Q8N394 836 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 NUP133Q8WUM0 1156 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 MTMR8Q96EF0 704 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 TSKSQ9UJT2 592 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 FEM1BQ9UK73 627 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 ZNF214Q9UL59 606 aaPredicted RBP13.81□□□□□ -0.2
AP3B1-203ENST00000517940 SLC12A7Q9Y666 1083 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 MYPNQ86TC9 1320 aa13.81□□□□□ -0.2
AP3B1-203ENST00000517940 VWA5AO00534 786 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 ZBTB43O43298 467 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 TLR2O60603 784 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 PPP1R11O60927 126 aaPredicted RBP13.8□□□□□ -0.2
AP3B1-203ENST00000517940 PARP1P09874 1014 aaKnown RBP13.8□□□□□ -0.2
AP3B1-203ENST00000517940 ADD1P35611 737 aaKnown RBP13.8□□□□□ -0.2
AP3B1-203ENST00000517940 STAT2P52630 851 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 RCAN1P53805 252 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 SCRN1Q12765 414 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 COG2Q14746 738 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 TMEM132BQ14DG7 1078 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 GPATCH4Q5T3I0 446 aaKnown RBP13.8□□□□□ -0.2
AP3B1-203ENST00000517940 SYDE2Q5VT97 1194 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 TMTC3Q6ZXV5 915 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
AP3B1-203ENST00000517940 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 KIFC2Q96AC6 838 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 PARK7Q99497 189 aaKnown RBP13.8□□□□□ -0.2
AP3B1-203ENST00000517940 SLF1Q9BQI6 1058 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 RANBP17Q9H2T7 1088 aaKnown RBP13.8□□□□□ -0.2
AP3B1-203ENST00000517940 JMJD4Q9H9V9 463 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 MORF4L1Q9UBU8 362 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 CPA4Q9UI42 421 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 CNTNAP5Q8WYK1 1306 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 BRCA2P51587 3418 aa13.8□□□□□ -0.2
AP3B1-203ENST00000517940 GOLGA8AA7E2F4 631 aa13.79□□□□□ -0.2
AP3B1-203ENST00000517940 KLRF2D3W0D1 207 aa13.79□□□□□ -0.2
AP3B1-203ENST00000517940 CTDNEP1O95476 244 aa13.79□□□□□ -0.2
AP3B1-203ENST00000517940 IRX3P78415 501 aaPredicted RBP13.79□□□□□ -0.2
AP3B1-203ENST00000517940 ADGRF4Q8IZF3 695 aa13.79□□□□□ -0.2
AP3B1-203ENST00000517940 ZNF274Q96GC6 653 aaPredicted RBP13.79□□□□□ -0.2
AP3B1-203ENST00000517940 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
AP3B1-203ENST00000517940 SAGE1Q9NXZ1 904 aa13.79□□□□□ -0.2
AP3B1-203ENST00000517940 CASP8AP2Q9UKL3 1982 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 FOXN1O15353 648 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 PFKFB2O60825 505 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 OSBPP22059 807 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 CCT2P78371 535 aaKnown RBP13.78□□□□□ -0.2
AP3B1-203ENST00000517940 MAP2K1Q02750 393 aaPredicted RBP13.78□□□□□ -0.2
AP3B1-203ENST00000517940 PABPC4Q13310 644 aaKnown RBP eCLIP13.78□□□□□ -0.2
AP3B1-203ENST00000517940 RTN1Q16799 776 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 SAMD1Q6SPF0 538 aaPredicted RBP13.78□□□□□ -0.2
AP3B1-203ENST00000517940 FAM160B2Q86V87 743 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 ANKRD13CQ8N6S4 541 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 NECAB1Q8N987 351 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 PRPF38AQ8NAV1 312 aaKnown RBP13.78□□□□□ -0.2
AP3B1-203ENST00000517940 SPZ1Q9BXG8 430 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 RIPK3Q9Y572 518 aa13.78□□□□□ -0.2
AP3B1-203ENST00000517940 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
AP3B1-203ENST00000517940 hCG_1642624A0A1W2PR95 340 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 PPFIA3O75145 1194 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 ALDH1A1P00352 501 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 METAP2P50579 478 aaKnown RBP eCLIP13.77□□□□□ -0.21
AP3B1-203ENST00000517940 ERVK-9P63128 1117 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 ERVK-24P63145 666 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 STK3Q13188 491 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 FAM110CQ1W6H9 321 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 GTF3C6Q969F1 213 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 ARHGAP39Q9C0H5 1083 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 PORCNQ9H237 461 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 ZFYVE28Q9HCC9 887 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 RABGAP1Q9Y3P9 1069 aa13.77□□□□□ -0.21
AP3B1-203ENST00000517940 ATP2A1O14983 1001 aa13.76□□□□□ -0.21
AP3B1-203ENST00000517940 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
AP3B1-203ENST00000517940 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
AP3B1-203ENST00000517940 CALM1P0DP23 149 aa13.76□□□□□ -0.21
AP3B1-203ENST00000517940 CALM2P0DP24 149 aa13.76□□□□□ -0.21
AP3B1-203ENST00000517940 CALM3P0DP25 149 aa13.76□□□□□ -0.21
AP3B1-203ENST00000517940 HSPA8P11142 646 aaKnown RBP13.76□□□□□ -0.21
AP3B1-203ENST00000517940 FGD1P98174 961 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms