RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 SPECC1Q5M775 1068 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 KRT79Q5XKE5 535 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 OTUD7BQ6GQQ9 843 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 EMBQ6PCB8 327 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRIM65Q6PJ69 517 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 SHC4Q6S5L8 630 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CLEC4GQ6UXB4 293 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TPTE2Q6XPS3 522 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 BICDL1Q6ZP65 573 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF662Q6ZS27 426 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CEP128Q6ZU80 1094 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 RSRC2Q7L4I2 434 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ARMC9Q7Z3E5 817 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 KRT25Q7Z3Z0 450 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 MAATS1Q7Z4T9 603 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TAX1BP1Q86VP1 789 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 DGKHQ86XP1 1220 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 DZIP3Q86Y13 1208 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 IFNL1Q8IU54 200 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC65Q8IXS2 484 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 MB21D2Q8IYB1 491 aaPredicted RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 C10orf67Q8IYJ2 551 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF654Q8IZM8 581 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 BLIDQ8IZY5 108 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 SYCE1Q8N0S2 351 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 MICALL1Q8N3F8 863 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CSGALNACT2Q8N6G5 542 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF713Q8N859 430 aaPredicted RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 MB21D1Q8N884 522 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ANKS4BQ8N8V4 417 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 GPATCH11Q8N954 259 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TTLL11Q8NHH1 800 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 GIMAP7Q8NHV1 300 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ERMNQ8TAM6 284 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 WDR66Q8TBY9 1149 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF526Q8TF50 670 aaPredicted RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 NELFBQ8WX92 580 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TSC1Q92574 1164 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TBC1D5Q92609 795 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 JARID2Q92833 1246 aaPredicted RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 SECISBP2LQ93073 1101 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 PHKBQ93100 1093 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 OSBP2Q969R2 916 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 JAKMIP2Q96AA8 810 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 LRRC45Q96CN5 670 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 RRP36Q96EU6 259 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 RBM33Q96EV2 1170 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 EDC3Q96F86 508 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 PAGE5Q96GU1 130 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 KAZALD1Q96I82 304 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZNF594Q96JF6 807 aaPredicted RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 PBKQ96KB5 322 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRIM47Q96LD4 638 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CLIC6Q96NY7 704 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 NLRP3Q96P20 1036 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 NOX5Q96PH1 765 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ORAI2Q96SN7 254 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 EIF3CQ99613 913 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 RHOXF2Q9BQY4 288 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CCDC77Q9BR77 488 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ISCA1Q9BUE6 129 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRAIPQ9BWF2 469 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CARD10Q9BWT7 1032 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 BRIP1Q9BX63 1249 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CAPS2Q9BXY5 557 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TRIM34Q9BYJ4 488 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TANGO6Q9C0B7 1094 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 PUS7LQ9H0K6 701 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 NT5C3AQ9H0P0 336 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CSRNP2Q9H175 543 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 VPS16Q9H269 839 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 GOLPH3LQ9H4A5 285 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 OCEL1Q9H607 264 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ZSWIM4Q9H7M6 989 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 PLCB1Q9NQ66 1216 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 STRN4Q9NRL3 753 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ABHD10Q9NUJ1 306 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 GOLGA6AQ9NYA3 693 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 FAM53CQ9NYF3 392 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TLR7Q9NYK1 1049 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 LIMA1Q9UHB6 759 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 PUF60Q9UHX1 559 aaKnown RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 FEZ2Q9UHY8 353 aaPredicted RBP2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 KCNG1Q9UIX4 513 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ANAPC4Q9UJX5 808 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 SERPINA10Q9UK55 444 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 HDAC9Q9UKV0 1011 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 FAM184BQ9ULE4 1060 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 CAPN11Q9UMQ6 739 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 RIPOR2Q9Y4F9 1068 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 MRFAP1Q9Y605 127 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ADGRG1Q9Y653 693 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 MAST3O60307 1309 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 ERBB3P21860 1342 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 PNPLA7Q6ZV29 1317 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 SYNRGQ9UMZ2 1314 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 TMEM94Q12767 1356 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 NRXN3Q9Y4C0 1643 aa2.3□□□□□ -2.04
RNU1-40P-201ENST00000516816 PIK3C2AO00443 1686 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms