RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 CHMP4CQ96CF2 233 aa15.84■□□□□ 0.13
PFDN1-206ENST00000514611 TINF2Q9BSI4 451 aa15.84■□□□□ 0.13
PFDN1-206ENST00000514611 INCENPQ9NQS7 918 aa15.84■□□□□ 0.13
PFDN1-206ENST00000514611 KBTBD13C9JR72 458 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 SLC3A2P08195 630 aaKnown RBP15.83■□□□□ 0.12
PFDN1-206ENST00000514611 RTP1P59025 263 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 CTDSPL2Q05D32 466 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 SLFN13Q68D06 897 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 RASGRP2Q7LDG7 609 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 TDHQ8IZJ6 230 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 ARRDC4Q8NCT1 418 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 GMCL1P1Q8NEA9 526 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 EVI5LQ96CN4 794 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 UBE2OQ9C0C9 1292 aaKnown RBP15.83■□□□□ 0.12
PFDN1-206ENST00000514611 SLC38A10Q9HBR0 1119 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 RAVER2Q9HCJ3 691 aaKnown RBP15.83■□□□□ 0.12
PFDN1-206ENST00000514611 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.83■□□□□ 0.12
PFDN1-206ENST00000514611 TACC3Q9Y6A5 838 aa15.83■□□□□ 0.12
PFDN1-206ENST00000514611 MYH4Q9Y623 1939 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 A0A0D9SFI3 127 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 NMT2O60551 498 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 LRRC41Q15345 812 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 FAM227BQ96M60 508 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 LNPKQ9C0E8 428 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 FEM1BQ9UK73 627 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 ISY1Q9ULR0 285 aaKnown RBP15.82■□□□□ 0.12
PFDN1-206ENST00000514611 SYNPO2Q9UMS6 1093 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 ATP11BQ9Y2G3 1177 aa15.82■□□□□ 0.12
PFDN1-206ENST00000514611 DIS3Q9Y2L1 958 aaKnown RBP15.82■□□□□ 0.12
PFDN1-206ENST00000514611 TSPY2A6NKD2 308 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 ATP2A1O14983 1001 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 ZBED4O75132 1171 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 ZNF865P0CJ78 1059 aaPredicted RBP15.81■□□□□ 0.12
PFDN1-206ENST00000514611 RARBP10826 455 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 BMP3P12645 472 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 ADCYAP1R1P41586 468 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 FERMT2Q96AC1 680 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 XPNPEP3Q9NQH7 507 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 NRBP1Q9UHY1 535 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 STX8Q9UNK0 236 aa15.81■□□□□ 0.12
PFDN1-206ENST00000514611 CTDP1Q9Y5B0 961 aaPredicted RBP15.81■□□□□ 0.12
PFDN1-206ENST00000514611 DNAJC25-GNG10A0A024R161 153 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 PGK1P00558 417 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 SNX17Q15036 470 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 TRIM60Q495X7 471 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 SLC39A5Q6ZMH5 540 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 ZNF589Q86UQ0 364 aaPredicted RBP15.8■□□□□ 0.12
PFDN1-206ENST00000514611 DDX11Q96FC9 970 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 IL17RBQ9NRM6 502 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 HOMER2Q9NSB8 354 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 COL6A3P12111 3177 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 PLXNA1Q9UIW2 1896 aa15.8■□□□□ 0.12
PFDN1-206ENST00000514611 AKR1A1P14550 325 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 MCCP23508 829 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 SLC1A4P43007 532 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 STAT2P52630 851 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 LRIT3Q3SXY7 679 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 B4GALNT3Q6L9W6 998 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 KCTD1Q719H9 257 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 GMCL1Q96IK5 515 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 FGD4Q96M96 766 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 PRDM5Q9NQX1 630 aaPredicted RBP15.79■□□□□ 0.12
PFDN1-206ENST00000514611 HELLSQ9NRZ9 838 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 ANAPC4Q9UJX5 808 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 ZHX1Q9UKY1 873 aaPredicted RBP15.79■□□□□ 0.12
PFDN1-206ENST00000514611 CNPY2Q9Y2B0 182 aa15.79■□□□□ 0.12
PFDN1-206ENST00000514611 LAMA2P24043 3122 aaKnown RBP15.79■□□□□ 0.12
PFDN1-206ENST00000514611 ZNF536O15090 1300 aa15.78■□□□□ 0.12
PFDN1-206ENST00000514611 SYNGAP1Q96PV0 1343 aa15.78■□□□□ 0.12
PFDN1-206ENST00000514611 RANBP6O60518 1105 aaKnown RBP15.78■□□□□ 0.12
PFDN1-206ENST00000514611 SNAI1O95863 264 aaPredicted RBP15.78■□□□□ 0.12
PFDN1-206ENST00000514611 OAZ1P54368 228 aa15.78■□□□□ 0.12
PFDN1-206ENST00000514611 IKQ13123 557 aaPredicted RBP15.78■□□□□ 0.12
PFDN1-206ENST00000514611 NMIQ13287 307 aaPredicted RBP15.78■□□□□ 0.12
PFDN1-206ENST00000514611 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.78■□□□□ 0.12
PFDN1-206ENST00000514611 ANKRD35Q8N283 1001 aa15.78■□□□□ 0.12
PFDN1-206ENST00000514611 MTMR7Q9Y216 660 aa15.78■□□□□ 0.12
PFDN1-206ENST00000514611 ZNFX1Q9P2E3 1918 aaKnown RBP15.78■□□□□ 0.12
PFDN1-206ENST00000514611 LTBP2Q14767 1821 aa15.78■□□□□ 0.12
PFDN1-206ENST00000514611 SYNRGQ9UMZ2 1314 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 TRIM6-TRIM34B2RNG4 842 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 ADAMTS4O75173 837 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 SNAP25P60880 206 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 MCMDC2Q4G0Z9 681 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 MAMDC4Q6UXC1 1216 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 Q7L0L9 218 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 RNF180Q86T96 592 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 SMC5Q8IY18 1101 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 MSL3Q8N5Y2 521 aaKnown RBP15.77■□□□□ 0.12
PFDN1-206ENST00000514611 CHST13Q8NET6 341 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 AGBL1Q96MI9 1066 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 LBHD1Q9BQE6 289 aaPredicted RBP15.77■□□□□ 0.12
PFDN1-206ENST00000514611 PDLIM7Q9NR12 457 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 PRKAG2Q9UGJ0 569 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 PHF24Q9UPV7 400 aa15.77■□□□□ 0.12
PFDN1-206ENST00000514611 A0A1W2PQ45 241 aaPredicted RBP15.76■□□□□ 0.11
PFDN1-206ENST00000514611 A0A1W2PQY0 241 aa15.76■□□□□ 0.11
PFDN1-206ENST00000514611 MYADML2A6NDP7 307 aa15.76■□□□□ 0.11
PFDN1-206ENST00000514611 ADCY6O43306 1168 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms