RNA–Protein interactions for RNA: ENST00000514537.5

CLDND1-230, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 1,013 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-230ENST00000514537 SLC38A10Q9HBR0 1119 aa27.26■■□□□ 1.95
CLDND1-230ENST00000514537 ZNF236Q9UL36 1845 aa27.25■■□□□ 1.95
CLDND1-230ENST00000514537 H0YGN5 161 aa27.25■■□□□ 1.95
CLDND1-230ENST00000514537 PCP11498 1178 aaKnown RBP27.25■■□□□ 1.95
CLDND1-230ENST00000514537 TRPV1Q8NER1 839 aa27.25■■□□□ 1.95
CLDND1-230ENST00000514537 TOMM22Q9NS69 142 aa27.25■■□□□ 1.95
CLDND1-230ENST00000514537 TCP11L1Q9NUJ3 509 aa27.25■■□□□ 1.95
CLDND1-230ENST00000514537 MYH4Q9Y623 1939 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 CEP290O15078 2479 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 TMEM232C9JQI7 657 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 GSPT1P15170 499 aaKnown RBP27.24■■□□□ 1.95
CLDND1-230ENST00000514537 MCCP23508 829 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 SLC1A4P43007 532 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 KCTD2Q14681 263 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 RRP12Q5JTH9 1297 aaKnown RBP27.24■■□□□ 1.95
CLDND1-230ENST00000514537 AKNAD1Q5T1N1 836 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 TTC22Q5TAA0 569 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 SNRNP48Q6IEG0 339 aaKnown RBP27.24■■□□□ 1.95
CLDND1-230ENST00000514537 STAG1Q8WVM7 1258 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 MAML3Q96JK9 1138 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 RIPK3Q9Y572 518 aa27.24■■□□□ 1.95
CLDND1-230ENST00000514537 CYBAP13498 195 aa27.23■■□□□ 1.95
CLDND1-230ENST00000514537 MFSD6Q6ZSS7 791 aa27.23■■□□□ 1.95
CLDND1-230ENST00000514537 TBC1D10CQ8IV04 446 aa27.23■■□□□ 1.95
CLDND1-230ENST00000514537 CPXCR1Q8N123 301 aa27.23■■□□□ 1.95
CLDND1-230ENST00000514537 CHURC1Q8WUH1 139 aa27.23■■□□□ 1.95
CLDND1-230ENST00000514537 DDX20Q9UHI6 824 aaKnown RBP27.23■■□□□ 1.95
CLDND1-230ENST00000514537 CTDP1Q9Y5B0 961 aaPredicted RBP27.23■■□□□ 1.95
CLDND1-230ENST00000514537 PLA2G6O60733 806 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 PGK2P07205 417 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 FDX1P10109 184 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 STAT2P52630 851 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 OAZ1P54368 228 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 ZNF792Q3KQV3 632 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 RCSD1Q6JBY9 416 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 FAM160B2Q86V87 743 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 DSCC1Q9BVC3 393 aa27.22■■□□□ 1.95
CLDND1-230ENST00000514537 RAVER2Q9HCJ3 691 aaKnown RBP27.22■■□□□ 1.95
CLDND1-230ENST00000514537 DIS3Q9Y2L1 958 aaKnown RBP27.22■■□□□ 1.95
CLDND1-230ENST00000514537 COL11A1P12107 1806 aaPredicted RBP27.21■■□□□ 1.95
CLDND1-230ENST00000514537 ZNF213O14771 459 aa27.21■■□□□ 1.95
CLDND1-230ENST00000514537 MSCO60682 206 aa27.21■■□□□ 1.95
CLDND1-230ENST00000514537 CNGA1P29973 690 aa27.21■■□□□ 1.95
CLDND1-230ENST00000514537 RNF41Q9H4P4 317 aaPredicted RBP27.21■■□□□ 1.95
CLDND1-230ENST00000514537 C11orf49Q9H6J7 331 aa27.21■■□□□ 1.95
CLDND1-230ENST00000514537 NR2E3Q9Y5X4 410 aa27.21■■□□□ 1.95
CLDND1-230ENST00000514537 CHMP4CQ96CF2 233 aa27.2■■□□□ 1.94
CLDND1-230ENST00000514537 TMEM47Q9BQJ4 181 aa27.2■■□□□ 1.94
CLDND1-230ENST00000514537 ISY1Q9ULR0 285 aaKnown RBP27.2■■□□□ 1.94
CLDND1-230ENST00000514537 TOP1P11387 765 aaKnown RBP27.19■■□□□ 1.94
CLDND1-230ENST00000514537 KCTD1Q719H9 257 aa27.19■■□□□ 1.94
CLDND1-230ENST00000514537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.19■■□□□ 1.94
CLDND1-230ENST00000514537 EVI5O60447 810 aa27.18■■□□□ 1.94
CLDND1-230ENST00000514537 COL6A1P12109 1028 aa27.18■■□□□ 1.94
CLDND1-230ENST00000514537 SLC4A3P48751 1232 aa27.18■■□□□ 1.94
CLDND1-230ENST00000514537 PRAMEF19Q5SWL8 479 aa27.18■■□□□ 1.94
CLDND1-230ENST00000514537 RASGRP2Q7LDG7 609 aa27.18■■□□□ 1.94
CLDND1-230ENST00000514537 DCAF4Q8WV16 495 aa27.18■■□□□ 1.94
CLDND1-230ENST00000514537 TTC14Q96N46 770 aa27.18■■□□□ 1.94
CLDND1-230ENST00000514537 IL25Q9H293 177 aa27.18■■□□□ 1.94
CLDND1-230ENST00000514537 NT5C2P49902 561 aa27.17■■□□□ 1.94
CLDND1-230ENST00000514537 IKQ13123 557 aaPredicted RBP27.17■■□□□ 1.94
CLDND1-230ENST00000514537 CHST13Q8NET6 341 aa27.17■■□□□ 1.94
CLDND1-230ENST00000514537 ESR2Q92731 530 aa27.17■■□□□ 1.94
CLDND1-230ENST00000514537 TINF2Q9BSI4 451 aa27.17■■□□□ 1.94
CLDND1-230ENST00000514537 FBXO40Q9UH90 709 aa27.17■■□□□ 1.94
CLDND1-230ENST00000514537 NRBP1Q9UHY1 535 aa27.17■■□□□ 1.94
CLDND1-230ENST00000514537 NEDD4P46934 1319 aa27.16■■□□□ 1.94
CLDND1-230ENST00000514537 DNAJC25-GNG10A0A024R161 153 aa27.16■■□□□ 1.94
CLDND1-230ENST00000514537 SEPT4O43236 478 aa27.16■■□□□ 1.94
CLDND1-230ENST00000514537 DDX11Q96FC9 970 aa27.16■■□□□ 1.94
CLDND1-230ENST00000514537 CTNNA3Q9UI47 895 aa27.16■■□□□ 1.94
CLDND1-230ENST00000514537 MTMR7Q9Y216 660 aa27.16■■□□□ 1.94
CLDND1-230ENST00000514537 PFASO15067 1338 aa27.16■■□□□ 1.94
CLDND1-230ENST00000514537 ZNF536O15090 1300 aa27.16■■□□□ 1.94
CLDND1-230ENST00000514537 PRR12Q9ULL5 1215 aa27.15■■□□□ 1.94
CLDND1-230ENST00000514537 COLQQ9Y215 455 aaPredicted RBP27.15■■□□□ 1.94
CLDND1-230ENST00000514537 IMMTQ16891 758 aaKnown RBP27.14■■□□□ 1.94
CLDND1-230ENST00000514537 HABP4Q5JVS0 413 aaKnown RBP27.14■■□□□ 1.94
CLDND1-230ENST00000514537 BTNL9Q6UXG8 535 aa27.14■■□□□ 1.94
CLDND1-230ENST00000514537 MSL3Q8N5Y2 521 aaKnown RBP27.14■■□□□ 1.94
CLDND1-230ENST00000514537 RAD50Q92878 1312 aa27.14■■□□□ 1.93
CLDND1-230ENST00000514537 CHMLP26374 656 aa27.13■■□□□ 1.93
CLDND1-230ENST00000514537 CCDC96Q2M329 555 aa27.13■■□□□ 1.93
CLDND1-230ENST00000514537 ANKRD35Q8N283 1001 aa27.13■■□□□ 1.93
CLDND1-230ENST00000514537 AGBL1Q96MI9 1066 aa27.13■■□□□ 1.93
CLDND1-230ENST00000514537 ZNFX1Q9P2E3 1918 aaKnown RBP27.13■■□□□ 1.93
CLDND1-230ENST00000514537 TKFCQ3LXA3 575 aa27.12■■□□□ 1.93
CLDND1-230ENST00000514537 TTBK2Q6IQ55 1244 aa27.12■■□□□ 1.93
CLDND1-230ENST00000514537 DGKHQ86XP1 1220 aa27.12■■□□□ 1.93
CLDND1-230ENST00000514537 DNM1LO00429 736 aa27.11■■□□□ 1.93
CLDND1-230ENST00000514537 KDM4AO75164 1064 aa27.11■■□□□ 1.93
CLDND1-230ENST00000514537 PDHBP11177 359 aa27.11■■□□□ 1.93
CLDND1-230ENST00000514537 SNAP25P60880 206 aa27.11■■□□□ 1.93
CLDND1-230ENST00000514537 ANO1Q5XXA6 986 aa27.11■■□□□ 1.93
CLDND1-230ENST00000514537 MAMDC4Q6UXC1 1216 aa27.11■■□□□ 1.93
CLDND1-230ENST00000514537 ZNF467Q7Z7K2 595 aaPredicted RBP27.11■■□□□ 1.93
CLDND1-230ENST00000514537 ARRDC4Q8NCT1 418 aa27.11■■□□□ 1.93
CLDND1-230ENST00000514537 RUFY2Q8WXA3 655 aa27.11■■□□□ 1.93
CLDND1-230ENST00000514537 ZKSCAN3Q9BRR0 538 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms