RNA–Protein interactions for RNA: ENST00000513240.5

DDR1-271, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 2,882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-271ENST00000513240 XDHP47989 1333 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 IVLP07476 585 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 TSPY3P0CV98 308 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 TSPY8P0CW00 308 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 TM4SF1P30408 202 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 CASP14P31944 242 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 SPECC1LQ69YQ0 1117 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 PPM1EQ8WY54 764 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 ARFGAP3Q9NP61 516 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 RTL9Q8NET4 1388 aa16.54■□□□□ 0.24
DDR1-271ENST00000513240 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
DDR1-271ENST00000513240 NRDCO43847 1150 aa16.53■□□□□ 0.24
DDR1-271ENST00000513240 LDHBP07195 334 aaKnown RBP16.53■□□□□ 0.24
DDR1-271ENST00000513240 ETF1P62495 437 aaKnown RBP16.53■□□□□ 0.24
DDR1-271ENST00000513240 SAMD1Q6SPF0 538 aaPredicted RBP16.53■□□□□ 0.24
DDR1-271ENST00000513240 ACRBPQ8NEB7 543 aa16.53■□□□□ 0.24
DDR1-271ENST00000513240 FUT8Q9BYC5 575 aa16.53■□□□□ 0.24
DDR1-271ENST00000513240 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
DDR1-271ENST00000513240 CEP131Q9UPN4 1083 aa16.53■□□□□ 0.24
DDR1-271ENST00000513240 CYTH3O43739 400 aa16.53■□□□□ 0.24
DDR1-271ENST00000513240 RAD9BQ6WBX8 426 aa16.53■□□□□ 0.24
DDR1-271ENST00000513240 SMARCC1Q92922 1105 aaPredicted RBP16.53■□□□□ 0.24
DDR1-271ENST00000513240 BRIP1Q9BX63 1249 aa16.53■□□□□ 0.24
DDR1-271ENST00000513240 CICQ96RK0 1608 aaPredicted RBP16.53■□□□□ 0.24
DDR1-271ENST00000513240 FRMPD2Q68DX3 1309 aaPredicted RBP16.53■□□□□ 0.24
DDR1-271ENST00000513240 ZNF18P17022 549 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 FXR1P51114 621 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDR1-271ENST00000513240 ATP2B2Q01814 1243 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 PSD3Q9NYI0 1048 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 SYNRGQ9UMZ2 1314 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 MYH13Q9UKX3 1938 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 FAM237AA0A1B0GTK4 181 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 PPP1R3GB7ZBB8 358 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 MCM6Q14566 821 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 ZNF219Q9P2Y4 722 aaPredicted RBP16.52■□□□□ 0.24
DDR1-271ENST00000513240 ANAPC4Q9UJX5 808 aa16.52■□□□□ 0.24
DDR1-271ENST00000513240 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.52■□□□□ 0.24
DDR1-271ENST00000513240 ATP8B1O43520 1251 aa16.52■□□□□ 0.23
DDR1-271ENST00000513240 MAP2K2P36507 400 aa16.52■□□□□ 0.23
DDR1-271ENST00000513240 PMS1P54277 932 aaKnown RBP16.52■□□□□ 0.23
DDR1-271ENST00000513240 CLEC4GQ6UXB4 293 aa16.52■□□□□ 0.23
DDR1-271ENST00000513240 ZNF444Q8N0Y2 327 aaPredicted RBP16.52■□□□□ 0.23
DDR1-271ENST00000513240 PDE11AQ9HCR9 933 aa16.52■□□□□ 0.23
DDR1-271ENST00000513240 BCCIPQ9P287 314 aaKnown RBP eCLIP16.52■□□□□ 0.23
DDR1-271ENST00000513240 NARFQ9UHQ1 456 aa16.52■□□□□ 0.23
DDR1-271ENST00000513240 N4BP1O75113 896 aaKnown RBP16.51■□□□□ 0.23
DDR1-271ENST00000513240 CORO7P57737 925 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 LETM2Q2VYF4 491 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 JAKMIP3Q5VZ66 844 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 ANKRD20A12PQ8NF67 263 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 ENOX1Q8TC92 643 aaKnown RBP16.51■□□□□ 0.23
DDR1-271ENST00000513240 LRRC15Q8TF66 581 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 EFCAB8A8MWE9 144 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 N4BP3O15049 544 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 MMS22LQ6ZRQ5 1243 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 TNFRSF25Q93038 417 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 TMEM260Q9NX78 707 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 TRIM10Q9UDY6 481 aa16.51■□□□□ 0.23
DDR1-271ENST00000513240 FAM170AA1A519 330 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 UFL1O94874 794 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 GPSM2P81274 684 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 NR1I3Q14994 352 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 MICALL1Q8N3F8 863 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 CCDC12Q8WUD4 166 aaPredicted RBP16.5■□□□□ 0.23
DDR1-271ENST00000513240 PARD6BQ9BYG5 372 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 C6orf229H3BNL8 230 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 PPFIBP1Q86W92 1011 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 BLIDQ8IZY5 108 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 LRRC4BQ9NT99 713 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 BIN2Q9UBW5 565 aaPredicted RBP16.5■□□□□ 0.23
DDR1-271ENST00000513240 BCL9LQ86UU0 1499 aa16.5■□□□□ 0.23
DDR1-271ENST00000513240 PHACTR2O75167 634 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 LONRF2Q1L5Z9 754 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 KCND1Q9NSA2 647 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 CCDC194A0A1B0GVG4 234 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 PSDA5PKW4 1024 aaPredicted RBP16.49■□□□□ 0.23
DDR1-271ENST00000513240 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 STAT6P42226 847 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 PRCPP42785 496 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 KLK7P49862 253 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 GSCP56915 257 aaPredicted RBP16.49■□□□□ 0.23
DDR1-271ENST00000513240 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
DDR1-271ENST00000513240 NELFBQ8WX92 580 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 TMEM47Q9BQJ4 181 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
DDR1-271ENST00000513240 FAN1Q9Y2M0 1017 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 ROBO1Q9Y6N7 1651 aa16.49■□□□□ 0.23
DDR1-271ENST00000513240 UBAP1LF5GYI3 381 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 BTDP43251 543 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 C12orf60Q5U649 245 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 APTXQ7Z2E3 356 aaKnown RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 SUGP1Q8IWZ8 645 aaKnown RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 PARP3Q9Y6F1 533 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 FAM196BA6NMK8 535 aa16.48■□□□□ 0.23
DDR1-271ENST00000513240 AKR1B15C9JRZ8 316 aaPredicted RBP16.48■□□□□ 0.23
DDR1-271ENST00000513240 SCNN1DP51172 638 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms