RNA–Protein interactions for RNA: ENST00000513222.1

CCHCR1-230, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 511 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-230ENST00000513222 NBPF3Q9H094 633 aa23.07■■□□□ 1.28
CCHCR1-230ENST00000513222 INCENPQ9NQS7 918 aa23.07■■□□□ 1.28
CCHCR1-230ENST00000513222 HIP1O00291 1037 aa23.06■■□□□ 1.28
CCHCR1-230ENST00000513222 PLS1Q14651 629 aa23.06■■□□□ 1.28
CCHCR1-230ENST00000513222 TRPV1Q8NER1 839 aa23.06■■□□□ 1.28
CCHCR1-230ENST00000513222 MAML3Q96JK9 1138 aa23.06■■□□□ 1.28
CCHCR1-230ENST00000513222 NRBP1Q9UHY1 535 aa23.06■■□□□ 1.28
CCHCR1-230ENST00000513222 RANBP2P49792 3224 aaKnown RBP23.06■■□□□ 1.28
CCHCR1-230ENST00000513222 BMP3P12645 472 aa23.05■■□□□ 1.28
CCHCR1-230ENST00000513222 SLFN13Q68D06 897 aa23.05■■□□□ 1.28
CCHCR1-230ENST00000513222 LRRC47Q8N1G4 583 aaKnown RBP23.05■■□□□ 1.28
CCHCR1-230ENST00000513222 DIS3LQ8TF46 1054 aaKnown RBP23.05■■□□□ 1.28
CCHCR1-230ENST00000513222 DPF3Q92784 378 aa23.05■■□□□ 1.28
CCHCR1-230ENST00000513222 DNAJC25-GNG10A0A024R161 153 aa23.04■■□□□ 1.28
CCHCR1-230ENST00000513222 TSPY2A6NKD2 308 aa23.04■■□□□ 1.28
CCHCR1-230ENST00000513222 PDE4AP27815 886 aa23.04■■□□□ 1.28
CCHCR1-230ENST00000513222 CYP2C19P33261 490 aa23.04■■□□□ 1.28
CCHCR1-230ENST00000513222 ZNF792Q3KQV3 632 aa23.04■■□□□ 1.28
CCHCR1-230ENST00000513222 PRO3102Q9H379 93 aa23.04■■□□□ 1.28
CCHCR1-230ENST00000513222 DDX20Q9UHI6 824 aaKnown RBP23.04■■□□□ 1.28
CCHCR1-230ENST00000513222 NR2E3Q9Y5X4 410 aa23.04■■□□□ 1.28
CCHCR1-230ENST00000513222 TRIOBPQ9H2D6 2365 aa23.03■■□□□ 1.28
CCHCR1-230ENST00000513222 MSL3Q8N5Y2 521 aaKnown RBP23.03■■□□□ 1.28
CCHCR1-230ENST00000513222 STAG1Q8WVM7 1258 aa23.03■■□□□ 1.28
CCHCR1-230ENST00000513222 MMP19Q99542 508 aa23.03■■□□□ 1.28
CCHCR1-230ENST00000513222 DNAH12Q6ZR08 3092 aa23.03■■□□□ 1.28
CCHCR1-230ENST00000513222 RAD21O60216 631 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 ZBED4O75132 1171 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 HABP4Q5JVS0 413 aaKnown RBP23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 RCSD1Q6JBY9 416 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 FAM160B2Q86V87 743 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 CHURC1Q8WUH1 139 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 TTC14Q96N46 770 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 C11orf49Q9H6J7 331 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 RIPK3Q9Y572 518 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 PFASO15067 1338 aa23.02■■□□□ 1.28
CCHCR1-230ENST00000513222 SEPT4O43236 478 aa23.01■■□□□ 1.27
CCHCR1-230ENST00000513222 NMT2O60551 498 aa23.01■■□□□ 1.27
CCHCR1-230ENST00000513222 STAT2P52630 851 aa23.01■■□□□ 1.27
CCHCR1-230ENST00000513222 KCTD2Q14681 263 aa23.01■■□□□ 1.27
CCHCR1-230ENST00000513222 AKNAD1Q5T1N1 836 aa23.01■■□□□ 1.27
CCHCR1-230ENST00000513222 DSCC1Q9BVC3 393 aa23.01■■□□□ 1.27
CCHCR1-230ENST00000513222 STX8Q9UNK0 236 aa23.01■■□□□ 1.27
CCHCR1-230ENST00000513222 RANBP6O60518 1105 aaKnown RBP23■■□□□ 1.27
CCHCR1-230ENST00000513222 SLC1A4P43007 532 aa23■■□□□ 1.27
CCHCR1-230ENST00000513222 SNRNP48Q6IEG0 339 aaKnown RBP23■■□□□ 1.27
CCHCR1-230ENST00000513222 MAMDC4Q6UXC1 1216 aa23■■□□□ 1.27
CCHCR1-230ENST00000513222 ZNF467Q7Z7K2 595 aaPredicted RBP23■■□□□ 1.27
CCHCR1-230ENST00000513222 CHST13Q8NET6 341 aa23■■□□□ 1.27
CCHCR1-230ENST00000513222 EVI5O60447 810 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 TTC22Q5TAA0 569 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 CWC27Q6UX04 472 aaKnown RBP22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 BTNL9Q6UXG8 535 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 KIFC2Q96AC6 838 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 TINF2Q9BSI4 451 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 RNF41Q9H4P4 317 aaPredicted RBP22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 DIAPH3Q9NSV4 1193 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 FBXO40Q9UH90 709 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 COLQQ9Y215 455 aaPredicted RBP22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 MCM3APO60318 1980 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 ZNF536O15090 1300 aa22.99■■□□□ 1.27
CCHCR1-230ENST00000513222 TMEM232C9JQI7 657 aa22.98■■□□□ 1.27
CCHCR1-230ENST00000513222 TOP1P11387 765 aaKnown RBP22.98■■□□□ 1.27
CCHCR1-230ENST00000513222 GSPT1P15170 499 aaKnown RBP22.98■■□□□ 1.27
CCHCR1-230ENST00000513222 MCCP23508 829 aa22.98■■□□□ 1.27
CCHCR1-230ENST00000513222 SAMD1Q6SPF0 538 aaPredicted RBP22.98■■□□□ 1.27
CCHCR1-230ENST00000513222 MFSD6Q6ZSS7 791 aa22.98■■□□□ 1.27
CCHCR1-230ENST00000513222 DCAF4Q8WV16 495 aa22.98■■□□□ 1.27
CCHCR1-230ENST00000513222 DNM1LO00429 736 aa22.97■■□□□ 1.27
CCHCR1-230ENST00000513222 PGK2P07205 417 aa22.97■■□□□ 1.27
CCHCR1-230ENST00000513222 TBC1D10CQ8IV04 446 aa22.97■■□□□ 1.27
CCHCR1-230ENST00000513222 TMEM47Q9BQJ4 181 aa22.97■■□□□ 1.27
CCHCR1-230ENST00000513222 SYNGAP1Q96PV0 1343 aa22.97■■□□□ 1.27
CCHCR1-230ENST00000513222 ZNF213O14771 459 aa22.96■■□□□ 1.27
CCHCR1-230ENST00000513222 SNHG28P0DPA3 235 aa22.96■■□□□ 1.27
CCHCR1-230ENST00000513222 TKFCQ3LXA3 575 aa22.96■■□□□ 1.27
CCHCR1-230ENST00000513222 ANKS1AQ92625 1134 aa22.96■■□□□ 1.27
CCHCR1-230ENST00000513222 RAVER2Q9HCJ3 691 aaKnown RBP22.96■■□□□ 1.27
CCHCR1-230ENST00000513222 HAND2P61296 217 aa22.95■■□□□ 1.26
CCHCR1-230ENST00000513222 DGKHQ86XP1 1220 aa22.95■■□□□ 1.26
CCHCR1-230ENST00000513222 CPXCR1Q8N123 301 aa22.95■■□□□ 1.26
CCHCR1-230ENST00000513222 ARRDC4Q8NCT1 418 aa22.95■■□□□ 1.26
CCHCR1-230ENST00000513222 FGD4Q96M96 766 aa22.95■■□□□ 1.26
CCHCR1-230ENST00000513222 PRR12Q9ULL5 1215 aa22.95■■□□□ 1.26
CCHCR1-230ENST00000513222 RAD50Q92878 1312 aa22.94■■□□□ 1.26
CCHCR1-230ENST00000513222 ZNF865P0CJ78 1059 aaPredicted RBP22.94■■□□□ 1.26
CCHCR1-230ENST00000513222 CNGA1P29973 690 aa22.94■■□□□ 1.26
CCHCR1-230ENST00000513222 ESR2Q92731 530 aa22.94■■□□□ 1.26
CCHCR1-230ENST00000513222 IL25Q9H293 177 aa22.94■■□□□ 1.26
CCHCR1-230ENST00000513222 LCTP09848 1927 aa22.93■■□□□ 1.26
CCHCR1-230ENST00000513222 A0A1W2PPC1 479 aa22.93■■□□□ 1.26
CCHCR1-230ENST00000513222 PRAMEF19Q5SWL8 479 aa22.93■■□□□ 1.26
CCHCR1-230ENST00000513222 KCTD1Q719H9 257 aa22.93■■□□□ 1.26
CCHCR1-230ENST00000513222 DDX11Q96FC9 970 aa22.93■■□□□ 1.26
CCHCR1-230ENST00000513222 RANBP17Q9H2T7 1088 aaKnown RBP22.93■■□□□ 1.26
CCHCR1-230ENST00000513222 CTNNA3Q9UI47 895 aa22.93■■□□□ 1.26
CCHCR1-230ENST00000513222 NEDD4P46934 1319 aa22.92■■□□□ 1.26
CCHCR1-230ENST00000513222 SNAI1O95863 264 aaPredicted RBP22.92■■□□□ 1.26
CCHCR1-230ENST00000513222 PDHBP11177 359 aa22.92■■□□□ 1.26
CCHCR1-230ENST00000513222 BMP8BP34820 402 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms