RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 PLA2G6O60733 806 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 SLC1A4P43007 532 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 RCSD1Q6JBY9 416 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 DPP9Q86TI2 863 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 SKAP1Q86WV1 359 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 RUFY2Q8WXA3 655 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 CHMP4CQ96CF2 233 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 CTNNA3Q9UI47 895 aa13.71□□□□□ -0.21
SH3RF1-205ENST00000511421 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 SGSM2O43147 1006 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 ZBED4O75132 1171 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 TOP1P11387 765 aaKnown RBP13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 FCER1AP12319 257 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 CAPN2P17655 700 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 COPB2P35606 906 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 STAT2P52630 851 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 IMMTQ16891 758 aaKnown RBP13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 KCTD1Q719H9 257 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 ESR2Q92731 530 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 TTC14Q96N46 770 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 RIPK3Q9Y572 518 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 ZNF236Q9UL36 1845 aa13.7□□□□□ -0.22
SH3RF1-205ENST00000511421 TFRCP02786 760 aaKnown RBP13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 CCND3P30281 292 aaPredicted RBP13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 NT5C2P49902 561 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 PTH1RQ03431 593 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 MFSD14CQ5VZR4 134 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 SNRNP48Q6IEG0 339 aaKnown RBP13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 CPXCR1Q8N123 301 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 CHURC1Q8WUH1 139 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 MMP19Q99542 508 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 RAVER2Q9HCJ3 691 aaKnown RBP13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 KDM4AO75164 1064 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 FARP2O94887 1054 aaPredicted RBP13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 FDX1P10109 184 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 CYP2C19P33261 490 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 OAZ1P54368 228 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 DCAF4Q8WV16 495 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 MTMR7Q9Y216 660 aa13.69□□□□□ -0.22
SH3RF1-205ENST00000511421 LAMA4Q16363 1823 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 B4E1Z4 1266 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 KCTD2Q14681 263 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 LHX8Q68G74 356 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 TRPV1Q8NER1 839 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 MAML3Q96JK9 1138 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 ZKSCAN3Q9BRR0 538 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 SLC5A4Q9NY91 659 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 ZSWIM5Q9P217 1185 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 OGDHLQ9ULD0 1010 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 ISY1Q9ULR0 285 aaKnown RBP13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 ZNF536O15090 1300 aa13.68□□□□□ -0.22
SH3RF1-205ENST00000511421 PGK2P07205 417 aa13.67□□□□□ -0.22
SH3RF1-205ENST00000511421 ZNF792Q3KQV3 632 aa13.67□□□□□ -0.22
SH3RF1-205ENST00000511421 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
SH3RF1-205ENST00000511421 TTBK2Q6IQ55 1244 aa13.67□□□□□ -0.22
SH3RF1-205ENST00000511421 BTNL9Q6UXG8 535 aa13.67□□□□□ -0.22
SH3RF1-205ENST00000511421 DGKHQ86XP1 1220 aa13.67□□□□□ -0.22
SH3RF1-205ENST00000511421 ANKS1AQ92625 1134 aa13.67□□□□□ -0.22
SH3RF1-205ENST00000511421 PRR12Q9ULL5 1215 aa13.67□□□□□ -0.22
SH3RF1-205ENST00000511421 CYP21A2P08686 494 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 SNHG28P0DPA3 235 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 PDHBP11177 359 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 CYBAP13498 195 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 CCDC96Q2M329 555 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 IQCA1Q86XH1 822 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 ANKLE1Q8NAG6 615 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 KRT23Q9C075 422 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 DIS3Q9Y2L1 958 aaKnown RBP13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 ZNFX1Q9P2E3 1918 aaKnown RBP13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 DNAJC25-GNG10A0A024R161 153 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 SNAP25P60880 206 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 CCDC178Q5BJE1 867 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 ENAHQ8N8S7 591 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 CHST13Q8NET6 341 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 MAP4K1Q92918 833 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 AGBL1Q96MI9 1066 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 ZSCAN10Q96SZ4 725 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 CNNM2Q9H8M5 875 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 TAF6LQ9Y6J9 622 aa13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
SH3RF1-205ENST00000511421 FRMPD2Q68DX3 1309 aaPredicted RBP13.65□□□□□ -0.22
SH3RF1-205ENST00000511421 SLC16A2P36021 539 aa13.65□□□□□ -0.22
SH3RF1-205ENST00000511421 ZNF543Q08ER8 600 aa13.65□□□□□ -0.22
SH3RF1-205ENST00000511421 CCDC136Q96JN2 1154 aa13.65□□□□□ -0.22
SH3RF1-205ENST00000511421 RANBP17Q9H2T7 1088 aaKnown RBP13.65□□□□□ -0.22
SH3RF1-205ENST00000511421 GPCPD1Q9NPB8 672 aa13.65□□□□□ -0.22
SH3RF1-205ENST00000511421 FBXO40Q9UH90 709 aa13.65□□□□□ -0.22
SH3RF1-205ENST00000511421 DDX20Q9UHI6 824 aaKnown RBP13.65□□□□□ -0.22
SH3RF1-205ENST00000511421 PRAMEF19Q5SWL8 479 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms