RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 ZNF296Q8WUU4 475 aaPredicted RBP7.87□□□□□ -1.15
LINC01088-205ENST00000509088 ASCC2Q9H1I8 757 aaPredicted RBP7.87□□□□□ -1.15
LINC01088-205ENST00000509088 ANTXR1Q9H6X2 564 aa7.87□□□□□ -1.15
LINC01088-205ENST00000509088 ZMYM5Q9UJ78 669 aa7.87□□□□□ -1.15
LINC01088-205ENST00000509088 FKTNO75072 461 aa7.86□□□□□ -1.15
LINC01088-205ENST00000509088 PI3P19957 117 aa7.86□□□□□ -1.15
LINC01088-205ENST00000509088 VIPR1P32241 457 aa7.86□□□□□ -1.15
LINC01088-205ENST00000509088 PCBP3P57721 371 aaKnown RBP7.86□□□□□ -1.15
LINC01088-205ENST00000509088 YBX1P67809 324 aaKnown RBP7.86□□□□□ -1.15
LINC01088-205ENST00000509088 CCDC27Q2M243 656 aa7.86□□□□□ -1.15
LINC01088-205ENST00000509088 TMEM132EQ6IEE7 984 aa7.86□□□□□ -1.15
LINC01088-205ENST00000509088 TMEM192Q8IY95 271 aa7.86□□□□□ -1.15
LINC01088-205ENST00000509088 CNTD2Q9H8S5 307 aa7.86□□□□□ -1.15
LINC01088-205ENST00000509088 CCDC9Q9Y3X0 531 aaKnown RBP7.86□□□□□ -1.15
LINC01088-205ENST00000509088 FADS2P1A8MWK0 482 aa7.85□□□□□ -1.15
LINC01088-205ENST00000509088 BMP7P18075 431 aa7.85□□□□□ -1.15
LINC01088-205ENST00000509088 CTSKP43235 329 aa7.85□□□□□ -1.15
LINC01088-205ENST00000509088 SRSF3P84103 164 aaKnown RBP7.85□□□□□ -1.15
LINC01088-205ENST00000509088 MLECQ14165 292 aa7.85□□□□□ -1.15
LINC01088-205ENST00000509088 NLRC3Q7RTR2 1065 aa7.85□□□□□ -1.15
LINC01088-205ENST00000509088 MARCH10Q8NA82 808 aaPredicted RBP7.85□□□□□ -1.15
LINC01088-205ENST00000509088 RGS22Q8NE09 1264 aa7.85□□□□□ -1.15
LINC01088-205ENST00000509088 UBP1Q9NZI7 540 aa7.85□□□□□ -1.15
LINC01088-205ENST00000509088 IRS4O14654 1257 aaPredicted RBP7.84□□□□□ -1.15
LINC01088-205ENST00000509088 ERVFRD-1P60508 538 aa7.84□□□□□ -1.15
LINC01088-205ENST00000509088 MRPL58Q14197 206 aaKnown RBP7.84□□□□□ -1.15
LINC01088-205ENST00000509088 ZNF385BQ569K4 471 aa7.84□□□□□ -1.15
LINC01088-205ENST00000509088 DACT3Q96B18 629 aaPredicted RBP7.84□□□□□ -1.15
LINC01088-205ENST00000509088 FCRL2Q96LA5 508 aaPredicted RBP7.84□□□□□ -1.15
LINC01088-205ENST00000509088 MEIS3P2A8K0S8 358 aa7.83□□□□□ -1.16
LINC01088-205ENST00000509088 PNLIPP16233 465 aa7.83□□□□□ -1.16
LINC01088-205ENST00000509088 SLC14A2Q15849 920 aa7.83□□□□□ -1.16
LINC01088-205ENST00000509088 HSF5Q4G112 596 aaPredicted RBP7.83□□□□□ -1.16
LINC01088-205ENST00000509088 SEZ6Q53EL9 994 aa7.83□□□□□ -1.16
LINC01088-205ENST00000509088 TCERG1LQ5VWI1 586 aa7.83□□□□□ -1.16
LINC01088-205ENST00000509088 SIGLEC10Q96LC7 697 aa7.83□□□□□ -1.16
LINC01088-205ENST00000509088 ERVK13-1Q9NX77 482 aa7.83□□□□□ -1.16
LINC01088-205ENST00000509088 GPR55Q9Y2T6 319 aaPredicted RBP7.83□□□□□ -1.16
LINC01088-205ENST00000509088 TNFRSF10CO14798 259 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 CLEC3AO75596 197 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 NME1P15531 152 aaKnown RBP7.82□□□□□ -1.16
LINC01088-205ENST00000509088 CCNFP41002 786 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 CDR1P51861 262 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 RTP1P59025 263 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 RAD51AP2Q09MP3 1159 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 LDLRAD1Q5T700 205 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 GK5Q6ZS86 529 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 SLCO6A1Q86UG4 719 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 TMEFF1Q8IYR6 380 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 REXO1Q8N1G1 1221 aaKnown RBP7.82□□□□□ -1.16
LINC01088-205ENST00000509088 ZCCHC4Q9H5U6 513 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 CHST7Q9NS84 486 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 KLHL14Q9P2G3 628 aa7.82□□□□□ -1.16
LINC01088-205ENST00000509088 N4BP3O15049 544 aa7.81□□□□□ -1.16
LINC01088-205ENST00000509088 ZNF205O95201 554 aa7.81□□□□□ -1.16
LINC01088-205ENST00000509088 CHMP4BP1P59074 171 aa7.81□□□□□ -1.16
LINC01088-205ENST00000509088 SLC6A18Q96N87 628 aa7.81□□□□□ -1.16
LINC01088-205ENST00000509088 XYLT2Q9H1B5 865 aa7.81□□□□□ -1.16
LINC01088-205ENST00000509088 GFOD1Q9NXC2 390 aa7.81□□□□□ -1.16
LINC01088-205ENST00000509088 TNFRSF10DQ9UBN6 386 aa7.81□□□□□ -1.16
LINC01088-205ENST00000509088 IRAK3Q9Y616 596 aa7.81□□□□□ -1.16
LINC01088-205ENST00000509088 RFXAPO00287 272 aa7.8□□□□□ -1.16
LINC01088-205ENST00000509088 SHOXO15266 292 aa7.8□□□□□ -1.16
LINC01088-205ENST00000509088 ERCC3P19447 782 aa7.8□□□□□ -1.16
LINC01088-205ENST00000509088 TMEM52Q8NDY8 209 aa7.8□□□□□ -1.16
LINC01088-205ENST00000509088 SLC9A7Q96T83 725 aa7.8□□□□□ -1.16
LINC01088-205ENST00000509088 GGT7Q9UJ14 662 aa7.8□□□□□ -1.16
LINC01088-205ENST00000509088 SSU72P8A0A1W2PR75 194 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 MEIS1O00470 390 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 ACRP10323 421 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 BMP8BP34820 402 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 RTP2Q5QGT7 225 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 CRTC3Q6UUV7 619 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 IGDCC3Q8IVU1 814 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 SLITRK4Q8IW52 837 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 RELTQ969Z4 430 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 TNFRSF12AQ9NP84 129 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 SIRT5Q9NXA8 310 aa7.79□□□□□ -1.16
LINC01088-205ENST00000509088 APOBRQ0VD83 1088 aa7.78□□□□□ -1.16
LINC01088-205ENST00000509088 GALNT18Q6P9A2 607 aa7.78□□□□□ -1.16
LINC01088-205ENST00000509088 TMEM151BQ8IW70 566 aa7.78□□□□□ -1.16
LINC01088-205ENST00000509088 EAF1Q96JC9 268 aaPredicted RBP7.78□□□□□ -1.16
LINC01088-205ENST00000509088 RTEL1Q9NZ71 1219 aa7.78□□□□□ -1.16
LINC01088-205ENST00000509088 ACSL6Q9UKU0 697 aa7.78□□□□□ -1.16
LINC01088-205ENST00000509088 C9IYK1 514 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 FOXD2O60548 495 aaPredicted RBP7.77□□□□□ -1.17
LINC01088-205ENST00000509088 VAV1P15498 845 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 AFF3P51826 1226 aaKnown RBP7.77□□□□□ -1.17
LINC01088-205ENST00000509088 KRTAP10-2P60368 255 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 HS2ST1Q7LGA3 356 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 MZB1Q8WU39 189 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 NT5C1AQ9BXI3 368 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 MKRN2Q9H000 416 aaKnown RBP7.77□□□□□ -1.17
LINC01088-205ENST00000509088 AP5S1Q9NUS5 200 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 PCDHB12Q9Y5F1 795 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 TAF6LQ9Y6J9 622 aa7.77□□□□□ -1.17
LINC01088-205ENST00000509088 PRKCAP17252 672 aa7.76□□□□□ -1.17
LINC01088-205ENST00000509088 AUHQ13825 339 aaKnown RBP7.76□□□□□ -1.17
LINC01088-205ENST00000509088 LDHDQ86WU2 507 aa7.76□□□□□ -1.17
LINC01088-205ENST00000509088 FAM129CQ86XR2 697 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms