RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 ELP3Q9H9T3 547 aa15.5■□□□□ 0.07
PRDM2-213ENST00000503842 GOPCQ9HD26 462 aa15.5■□□□□ 0.07
PRDM2-213ENST00000503842 AFG3L2Q9Y4W6 797 aa15.5■□□□□ 0.07
PRDM2-213ENST00000503842 PTPDC1A2A3K4 754 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 USP17L10C9JJH3 530 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 CDKL5O76039 1030 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 BACE1P56817 501 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 PPATQ06203 517 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 SPP2Q13103 211 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 SLC35G1Q2M3R5 365 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 GPATCH4Q5T3I0 446 aaKnown RBP15.49■□□□□ 0.07
PRDM2-213ENST00000503842 TMEM92Q6UXU6 159 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 NBPF11Q86T75 865 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 ERO1BQ86YB8 467 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 SRBD1Q8N5C6 995 aaKnown RBP15.49■□□□□ 0.07
PRDM2-213ENST00000503842 C2orf69Q8N8R5 385 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 FEZ1Q99689 392 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 LZTS2Q9BRK4 669 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 SMC3Q9UQE7 1217 aa15.49■□□□□ 0.07
PRDM2-213ENST00000503842 CNTNAP5Q8WYK1 1306 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 STK36Q9NRP7 1315 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 DTNBO60941 627 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 TOMM70O94826 608 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 GOLGA8HP0CJ92 632 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 SMARCA1P28370 1054 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 DDIT3P35638 169 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 SLC1A4P43007 532 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 USP14P54578 494 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 HMGN5P82970 282 aaKnown RBP15.48■□□□□ 0.07
PRDM2-213ENST00000503842 MTMR2Q13614 643 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 LPAR1Q92633 364 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 DDX27Q96GQ7 796 aaKnown RBP15.48■□□□□ 0.07
PRDM2-213ENST00000503842 C12orf42Q96LP6 360 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 CWC22Q9HCG8 908 aaKnown RBP15.48■□□□□ 0.07
PRDM2-213ENST00000503842 EMILIN3Q9NT22 766 aa15.48■□□□□ 0.07
PRDM2-213ENST00000503842 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
PRDM2-213ENST00000503842 FRMPD2Q68DX3 1309 aaPredicted RBP15.47■□□□□ 0.07
PRDM2-213ENST00000503842 PTPRFP10586 1907 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 TRIM75PA6NK02 468 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 C19orf81C9J6K1 198 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 KLRF2D3W0D1 207 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 FMNL1O95466 1100 aaPredicted RBP15.47■□□□□ 0.07
PRDM2-213ENST00000503842 BMP3P12645 472 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 FDPSP14324 419 aaKnown RBP15.47■□□□□ 0.07
PRDM2-213ENST00000503842 GJB2P29033 226 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 PPIL2Q13356 520 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 ZYXQ15942 572 aaKnown RBP15.47■□□□□ 0.07
PRDM2-213ENST00000503842 CCDC96Q2M329 555 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 SH3D19Q5HYK7 790 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 SPICE1Q8N0Z3 855 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 CMTR1Q8N1G2 835 aaKnown RBP15.47■□□□□ 0.07
PRDM2-213ENST00000503842 NUP88Q99567 741 aaPredicted RBP15.47■□□□□ 0.07
PRDM2-213ENST00000503842 SPZ1Q9BXG8 430 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 GPCPD1Q9NPB8 672 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 KCNH4Q9UQ05 1017 aa15.47■□□□□ 0.07
PRDM2-213ENST00000503842 CXCL11O14625 94 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 WDR46O15213 610 aaKnown RBP15.46■□□□□ 0.07
PRDM2-213ENST00000503842 CYTH3O43739 400 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 RAD21O60216 631 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 GJA5P36382 358 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.07
PRDM2-213ENST00000503842 TTBK2Q6IQ55 1244 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 BTNL9Q6UXG8 535 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 KCTD1Q719H9 257 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 PHKBQ93100 1093 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 OPTNQ96CV9 577 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 SLC10A4Q96EP9 437 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 DDX11Q96FC9 970 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 SLC26A6Q9BXS9 759 aa15.46■□□□□ 0.07
PRDM2-213ENST00000503842 RNF26Q9BY78 433 aaPredicted RBP15.46■□□□□ 0.07
PRDM2-213ENST00000503842 ORC3Q9UBD5 711 aaPredicted RBP15.46■□□□□ 0.07
PRDM2-213ENST00000503842 IRF6O14896 467 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 PRPF3O43395 683 aaKnown RBP15.45■□□□□ 0.06
PRDM2-213ENST00000503842 PLA2G6O60733 806 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 PPFIA3O75145 1194 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 HMGCS2P54868 508 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 FSTL1Q12841 308 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 DGKZQ13574 1117 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 FAM83BQ5T0W9 1011 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 CCDC82Q8N4S0 544 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 UBA5Q9GZZ9 404 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 CPVLQ9H3G5 476 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 RIOX1Q9H6W3 641 aa15.45■□□□□ 0.06
PRDM2-213ENST00000503842 A0A0G2JLL6 359 aaPredicted RBP15.44■□□□□ 0.06
PRDM2-213ENST00000503842 VCAM1P19320 739 aa15.44■□□□□ 0.06
PRDM2-213ENST00000503842 PPP1R15BQ5SWA1 713 aa15.44■□□□□ 0.06
PRDM2-213ENST00000503842 PRRT2Q7Z6L0 340 aaPredicted RBP15.44■□□□□ 0.06
PRDM2-213ENST00000503842 TRIM22Q8IYM9 498 aa15.44■□□□□ 0.06
PRDM2-213ENST00000503842 MTMR8Q96EF0 704 aa15.44■□□□□ 0.06
PRDM2-213ENST00000503842 WNK4Q96J92 1243 aa15.44■□□□□ 0.06
PRDM2-213ENST00000503842 RBM27Q9P2N5 1060 aaKnown RBP15.44■□□□□ 0.06
PRDM2-213ENST00000503842 MYH6P13533 1939 aa15.43■□□□□ 0.06
PRDM2-213ENST00000503842 TMEM232C9JQI7 657 aa15.43■□□□□ 0.06
PRDM2-213ENST00000503842 DEXIO95424 95 aa15.43■□□□□ 0.06
PRDM2-213ENST00000503842 SLC16A2P36021 539 aa15.43■□□□□ 0.06
PRDM2-213ENST00000503842 HUNKP57058 714 aa15.43■□□□□ 0.06
PRDM2-213ENST00000503842 PKN1Q16512 942 aa15.43■□□□□ 0.06
PRDM2-213ENST00000503842 SYDE2Q5VT97 1194 aa15.43■□□□□ 0.06
PRDM2-213ENST00000503842 FAM184AQ8NB25 1140 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms