RNA–Protein interactions for RNA: ENST00000502367.1

NFKB1-203, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-203ENST00000502367 USP32Q8NFA0 1604 aa8.11□□□□□ -1.11
NFKB1-203ENST00000502367 BRD4O60885 1362 aaPredicted RBP8.1□□□□□ -1.11
NFKB1-203ENST00000502367 WASH4PA8MWX3 477 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 DNAJA2O60884 412 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 TMF1P82094 1093 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 IDI1Q13907 227 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 TMEM87AQ8NBN3 555 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 FBXL18Q96ME1 805 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 BACH2Q9BYV9 841 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 TNKS2Q9H2K2 1166 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 PRDM5Q9NQX1 630 aaPredicted RBP8.1□□□□□ -1.11
NFKB1-203ENST00000502367 GTF2IRD1Q9UHL9 959 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 SUPT16HQ9Y5B9 1047 aaKnown RBP8.1□□□□□ -1.11
NFKB1-203ENST00000502367 A2ML1A8K2U0 1454 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 ALKQ9UM73 1620 aa8.1□□□□□ -1.11
NFKB1-203ENST00000502367 EIF3AQ14152 1382 aaKnown RBP8.1□□□□□ -1.11
NFKB1-203ENST00000502367 MYBBP1AQ9BQG0 1328 aaKnown RBP8.09□□□□□ -1.11
NFKB1-203ENST00000502367 CHURC1-FNTBB4DL54 471 aa8.09□□□□□ -1.11
NFKB1-203ENST00000502367 PRKCQQ04759 706 aa8.09□□□□□ -1.11
NFKB1-203ENST00000502367 PLCL1Q15111 1095 aa8.09□□□□□ -1.11
NFKB1-203ENST00000502367 MCATQ8IVS2 390 aaKnown RBP8.09□□□□□ -1.11
NFKB1-203ENST00000502367 MRPL41Q8IXM3 137 aaKnown RBP8.09□□□□□ -1.11
NFKB1-203ENST00000502367 MFSD2AQ8NA29 543 aa8.09□□□□□ -1.11
NFKB1-203ENST00000502367 PNISRQ8TF01 805 aaKnown RBP8.09□□□□□ -1.11
NFKB1-203ENST00000502367 HRASLS5Q96KN8 279 aa8.09□□□□□ -1.11
NFKB1-203ENST00000502367 HSPA12BQ96MM6 686 aa8.09□□□□□ -1.11
NFKB1-203ENST00000502367 UBR1Q8IWV7 1749 aa8.09□□□□□ -1.11
NFKB1-203ENST00000502367 IGF2BP3O00425 579 aaKnown RBP eCLIP8.08□□□□□ -1.12
NFKB1-203ENST00000502367 BPNT1O95861 308 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 CAP2P40123 477 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 CRKP46108 304 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 RALBP1Q15311 655 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 PANK3Q9H999 370 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 MKNK2Q9HBH9 465 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 KLHL3Q9UH77 587 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 ADAMTS1Q9UHI8 967 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 VAV3Q9UKW4 847 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 KNDC1Q76NI1 1749 aa8.08□□□□□ -1.12
NFKB1-203ENST00000502367 ZBED9Q6R2W3 1325 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 BLMP54132 1417 aaPredicted RBP8.07□□□□□ -1.12
NFKB1-203ENST00000502367 TMEM265A0A087WTH1 108 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 EIF4A3P38919 411 aaKnown RBP8.07□□□□□ -1.12
NFKB1-203ENST00000502367 ZNF792Q3KQV3 632 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 SFRP5Q5T4F7 317 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 SLC6A19Q695T7 634 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 CBLL1Q75N03 491 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 PPP1R13LQ8WUF5 828 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 ZNF296Q8WUU4 475 aaPredicted RBP8.07□□□□□ -1.12
NFKB1-203ENST00000502367 MBNL3Q9NUK0 354 aaKnown RBP8.07□□□□□ -1.12
NFKB1-203ENST00000502367 SLC52A1Q9NWF4 448 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 REV1Q9UBZ9 1251 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 NPC1L1Q9UHC9 1359 aa8.07□□□□□ -1.12
NFKB1-203ENST00000502367 C3P01024 1663 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 SHPRHQ149N8 1683 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 LRRN2O75325 713 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 RNASE1P07998 156 aaKnown RBP8.06□□□□□ -1.12
NFKB1-203ENST00000502367 PDE4BQ07343 736 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 CCDC84Q86UT8 332 aaPredicted RBP8.06□□□□□ -1.12
NFKB1-203ENST00000502367 FAM9BQ8IZU0 186 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 FAM13CQ8NE31 585 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 BRMS1Q9HCU9 246 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 ATP13A1Q9HD20 1204 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 UBP1Q9NZI7 540 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 DLC1Q96QB1 1528 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 INSRP06213 1382 aa8.06□□□□□ -1.12
NFKB1-203ENST00000502367 CENPJQ9HC77 1338 aaPredicted RBP8.05□□□□□ -1.12
NFKB1-203ENST00000502367 FAM155AB1AL88 458 aaPredicted RBP8.05□□□□□ -1.12
NFKB1-203ENST00000502367 H3BS24 57 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 HTR3BO95264 441 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 FUT4P22083 530 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 TNK2Q07912 1038 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 FAM196AQ6ZSG2 479 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 REC114Q7Z4M0 266 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 DNAJB8Q8NHS0 232 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 BAHD1Q8TBE0 780 aaPredicted RBP8.05□□□□□ -1.12
NFKB1-203ENST00000502367 SEMA3GQ9NS98 782 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 MAPK8IP1Q9UQF2 711 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 TACC3Q9Y6A5 838 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 CAPN6Q9Y6Q1 641 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 ANKRD26Q9UPS8 1709 aa8.05□□□□□ -1.12
NFKB1-203ENST00000502367 GREM1O60565 184 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 IKZF1Q13422 519 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 PWP1Q13610 501 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 TMEM132EQ6IEE7 984 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 HS2ST1Q7LGA3 356 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 STK11IPQ8N1F8 1099 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 MFSD4AQ8N468 514 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 MISP3Q96FF7 219 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 Q96M66 194 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 PCDHGB7Q9Y5F8 929 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 ST14Q9Y5Y6 855 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 FER1L4A9Z1Z3 1794 aa8.04□□□□□ -1.12
NFKB1-203ENST00000502367 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
NFKB1-203ENST00000502367 SMG6Q86US8 1419 aaKnown RBP8.03□□□□□ -1.12
NFKB1-203ENST00000502367 RIMS2Q9UQ26 1411 aa8.03□□□□□ -1.12
NFKB1-203ENST00000502367 ZMYM3Q14202 1370 aa8.03□□□□□ -1.12
NFKB1-203ENST00000502367 CNGB1Q14028 1251 aaPredicted RBP8.03□□□□□ -1.12
NFKB1-203ENST00000502367 MPP2Q14168 576 aa8.03□□□□□ -1.12
NFKB1-203ENST00000502367 SEZ6Q53EL9 994 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms