RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 MINPP1Q9UNW1 487 aa5.46□□□□□ -1.54
PSPC1-205ENST00000497722 ETV2O00321 342 aaPredicted RBP5.45□□□□□ -1.54
PSPC1-205ENST00000497722 TMEM253P0C7T8 217 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 MCM4P33991 863 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 CTSKP43235 329 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 KIR2DL1P43626 348 aaPredicted RBP5.45□□□□□ -1.54
PSPC1-205ENST00000497722 KIR2DL2P43627 348 aaPredicted RBP5.45□□□□□ -1.54
PSPC1-205ENST00000497722 RBM25P49756 843 aaKnown RBP5.45□□□□□ -1.54
PSPC1-205ENST00000497722 ZNF394Q53GI3 561 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 USP48Q86UV5 1035 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 RBBP8NLQ8NC74 664 aaPredicted RBP5.45□□□□□ -1.54
PSPC1-205ENST00000497722 HHIPL1Q96JK4 782 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 C20orf173Q96LM9 149 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 SLC6A18Q96N87 628 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 SLC26A8Q96RN1 970 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 MCOLN1Q9GZU1 580 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 ASCC2Q9H1I8 757 aaPredicted RBP5.45□□□□□ -1.54
PSPC1-205ENST00000497722 SLC6A17Q9H1V8 727 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 PRR13Q9NZ81 148 aa5.45□□□□□ -1.54
PSPC1-205ENST00000497722 DDX41Q9UJV9 622 aaKnown RBP5.45□□□□□ -1.54
PSPC1-205ENST00000497722 NRDCO43847 1150 aa5.44□□□□□ -1.54
PSPC1-205ENST00000497722 PEX10O60683 326 aa5.44□□□□□ -1.54
PSPC1-205ENST00000497722 RECKO95980 971 aa5.44□□□□□ -1.54
PSPC1-205ENST00000497722 PCBP3P57721 371 aaKnown RBP5.44□□□□□ -1.54
PSPC1-205ENST00000497722 ZPBP2Q6X784 338 aa5.44□□□□□ -1.54
PSPC1-205ENST00000497722 METTL16Q86W50 562 aaKnown RBP5.44□□□□□ -1.54
PSPC1-205ENST00000497722 RGS22Q8NE09 1264 aa5.44□□□□□ -1.54
PSPC1-205ENST00000497722 GCM1Q9NP62 436 aa5.44□□□□□ -1.54
PSPC1-205ENST00000497722 SUCOQ9UBS9 1254 aaKnown RBP5.44□□□□□ -1.54
PSPC1-205ENST00000497722 PCDHGB7Q9Y5F8 929 aa5.44□□□□□ -1.54
PSPC1-205ENST00000497722 TCAF2A6NFQ2 919 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 C9IYK1 514 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 USP2O75604 605 aaPredicted RBP5.43□□□□□ -1.54
PSPC1-205ENST00000497722 ZNF205O95201 554 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 SYPP08247 313 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 RPL10P27635 214 aaKnown RBP5.43□□□□□ -1.54
PSPC1-205ENST00000497722 GALK1P51570 392 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 AUHQ13825 339 aaKnown RBP5.43□□□□□ -1.54
PSPC1-205ENST00000497722 ATG14Q6ZNE5 492 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 WAPLQ7Z5K2 1190 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 BORCS6Q96GS4 357 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 CHST7Q9NS84 486 aa5.43□□□□□ -1.54
PSPC1-205ENST00000497722 SMG5Q9UPR3 1016 aaKnown RBP5.43□□□□□ -1.54
PSPC1-205ENST00000497722 FADS2P1A8MWK0 482 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 FOXD2O60548 495 aaPredicted RBP5.42□□□□□ -1.54
PSPC1-205ENST00000497722 IMPDH2P12268 514 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 SYN1P17600 705 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 BMP8BP34820 402 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 PMS1P54277 932 aaKnown RBP5.42□□□□□ -1.54
PSPC1-205ENST00000497722 CHMP4BP1P59074 171 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 ANKRD39Q53RE8 183 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 PPFIBP1Q86W92 1011 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 RNF34Q969K3 372 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 SYTL4Q96C24 671 aaPredicted RBP5.42□□□□□ -1.54
PSPC1-205ENST00000497722 PLCD4Q9BRC7 762 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 CRTAC1Q9NQ79 661 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 GFOD1Q9NXC2 390 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 GPR160Q9UJ42 338 aa5.42□□□□□ -1.54
PSPC1-205ENST00000497722 TEX51A0A1B0GUA7 166 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 HRKO00198 91 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 NUAK1O60285 661 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 DLG4P78352 724 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 ZYXQ15942 572 aaKnown RBP5.41□□□□□ -1.54
PSPC1-205ENST00000497722 RTP2Q5QGT7 225 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 C7orf61Q8IZ16 206 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 TMEM52Q8NDY8 209 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 KCNN1Q92952 543 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 FCRL2Q96LA5 508 aaPredicted RBP5.41□□□□□ -1.54
PSPC1-205ENST00000497722 DHRS1Q96LJ7 313 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 TM9SF2Q99805 663 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 PARD6AQ9NPB6 346 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 ERVK13-1Q9NX77 482 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 TNFRSF10DQ9UBN6 386 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 PCDHB12Q9Y5F1 795 aa5.41□□□□□ -1.54
PSPC1-205ENST00000497722 FKTNO75072 461 aa5.4□□□□□ -1.54
PSPC1-205ENST00000497722 SEMA7AO75326 666 aa5.4□□□□□ -1.54
PSPC1-205ENST00000497722 VAV1P15498 845 aa5.4□□□□□ -1.54
PSPC1-205ENST00000497722 LINC00310P59036 64 aa5.4□□□□□ -1.54
PSPC1-205ENST00000497722 ZNF605Q86T29 641 aa5.4□□□□□ -1.54
PSPC1-205ENST00000497722 SLCO6A1Q86UG4 719 aa5.4□□□□□ -1.54
PSPC1-205ENST00000497722 SRRTQ9BXP5 876 aaKnown RBP5.4□□□□□ -1.54
PSPC1-205ENST00000497722 MKRN2Q9H000 416 aaKnown RBP5.4□□□□□ -1.54
PSPC1-205ENST00000497722 ZMYM5Q9UJ78 669 aa5.4□□□□□ -1.54
PSPC1-205ENST00000497722 PPT2Q9UMR5 302 aa5.4□□□□□ -1.54
PSPC1-205ENST00000497722 SCAMP3O14828 347 aaKnown RBP5.39□□□□□ -1.55
PSPC1-205ENST00000497722 PNLIPP16233 465 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 SOX9P48436 509 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 ERVFRD-1P60508 538 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 YBX1P67809 324 aaKnown RBP5.39□□□□□ -1.55
PSPC1-205ENST00000497722 KIR3DS1Q14943 382 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 HSF5Q4G112 596 aaPredicted RBP5.39□□□□□ -1.55
PSPC1-205ENST00000497722 AXDND1Q5T1B0 1012 aaPredicted RBP5.39□□□□□ -1.55
PSPC1-205ENST00000497722 CRTC3Q6UUV7 619 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 UNC5AQ6ZN44 842 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 RUFY4Q6ZNE9 571 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 CEP128Q6ZU80 1094 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 LSRQ86X29 649 aaPredicted RBP5.39□□□□□ -1.55
PSPC1-205ENST00000497722 RASGRP4Q8TDF6 673 aa5.39□□□□□ -1.55
PSPC1-205ENST00000497722 MRRFQ96E11 262 aaKnown RBP5.39□□□□□ -1.55
PSPC1-205ENST00000497722 OR14I1A6ND48 311 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms