RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 FILIP1LQ4L180 1135 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 SLC51AQ86UW1 340 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 SYCP3Q8IZU3 236 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 PRPF38AQ8NAV1 312 aaKnown RBP10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 RTEL1Q9NZ71 1219 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 BRPF3Q9ULD4 1205 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 NRAPQ86VF7 1730 aa10.72□□□□□ -0.69
GAPVD1-219ENST00000495955 TCRBV5S4A2TA0A5A2 114 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 CAP2P40123 477 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 GALNT17Q6IS24 598 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 FAM173BQ6P4H8 233 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 EEPD1Q7L9B9 569 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 CDCA5Q96FF9 252 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 PGBD1Q96JS3 809 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 TSG101Q99816 390 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 STOX1Q6ZVD7 989 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 FZD1Q9UP38 647 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 MARF1Q9Y4F3 1742 aaKnown RBP10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 FOSP01100 380 aaPredicted RBP10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 HOXA13P31271 388 aaPredicted RBP10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 ANO1Q5XXA6 986 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 KANK3Q6NY19 840 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 SEPT14Q6ZU15 432 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 STXBP4Q6ZWJ1 553 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 MRPS27Q92552 414 aaKnown RBP10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 SMARCE1Q969G3 411 aa10.71□□□□□ -0.69
GAPVD1-219ENST00000495955 KLRG2A4D1S0 409 aaPredicted RBP10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 GAS7O60861 476 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 SREBF2Q12772 1141 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 RASGRP4Q8TDF6 673 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 TRERF1Q96PN7 1200 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 KIF20AO95235 890 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 MSNP26038 577 aaKnown RBP10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 INPP5BP32019 993 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 RNF207Q6ZRF8 634 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 TMTC3Q6ZXV5 915 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 LDHDQ86WU2 507 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 GLG1Q92896 1179 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 DDX4Q9NQI0 724 aaKnown RBP10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 NYAP2Q9P242 653 aa10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 ZHX1Q9UKY1 873 aaPredicted RBP10.71□□□□□ -0.7
GAPVD1-219ENST00000495955 NHSQ6T4R5 1651 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 SHTN1A0MZ66 631 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 BTBD18B2RXH4 712 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 BIN1O00499 593 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ZBTB5O15062 677 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 PRPF3O43395 683 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 NEMFO60524 1076 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ECE1P42892 770 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 UBE2HP62256 183 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 GRM4Q14833 912 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 UBE2SQ16763 222 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 PLA2G4DQ86XP0 818 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 LPAR1Q92633 364 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 EXOC1Q9NV70 894 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 PCDHA4Q9UN74 947 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 hCG_1984214I3L0E3 225 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 SERPINC1P01008 464 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 IFNAR1P17181 557 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 HAUS3Q68CZ6 603 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 NEK8Q86SG6 692 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 NOSTRINQ8IVI9 506 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ZNF713Q8N859 430 aaPredicted RBP10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 NSUN7Q8NE18 718 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 PARK7Q99497 189 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 IL25Q9H293 177 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ZFYVE28Q9HCC9 887 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 WDR46O15213 610 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 NDUFB10O96000 172 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 GTF2A2P52657 109 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 COG2Q14746 738 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ISM2Q6H9L7 571 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ADGRF4Q8IZF3 695 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 C5P01031 1676 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ASIC1P78348 528 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 TOB2Q14106 344 aaPredicted RBP10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ERO1BQ86YB8 467 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ZFPM1Q8IX07 1006 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 LRWD1Q9UFC0 647 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 DDX25Q9UHL0 483 aaKnown RBP10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 WDR19Q8NEZ3 1342 aa10.7□□□□□ -0.7
GAPVD1-219ENST00000495955 ITGB4P16144 1822 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 OPTNQ96CV9 577 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 VCPKMTQ9H867 229 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 DDX19AQ9NUU7 478 aaKnown RBP10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 FBXO40Q9UH90 709 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 LARGE1O95461 756 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 CCND2P30279 289 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 STAT3P40763 770 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 FAM47CQ5HY64 1035 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 RNF146Q9NTX7 359 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 SALL3Q9BXA9 1300 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 OFD1O75665 1012 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 FAM13AO94988 1023 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 EIF2AK2P19525 551 aaKnown RBP10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 CCDC183Q5T5S1 534 aa10.69□□□□□ -0.7
GAPVD1-219ENST00000495955 TTBK2Q6IQ55 1244 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms