RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 MAGEB6P1A0A0J9YX57 407 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 ATP9BO43861 1147 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 GJB1P08034 283 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 DYNLL1P63167 89 aaKnown RBP8.09□□□□□ -1.11
VPS52-219ENST00000493379 GABPAQ06546 454 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 NOL9Q5SY16 702 aaKnown RBP8.09□□□□□ -1.11
VPS52-219ENST00000493379 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.09□□□□□ -1.11
VPS52-219ENST00000493379 ARMC9Q7Z3E5 817 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 NKX2-3Q8TAU0 364 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 DIS3LQ8TF46 1054 aaKnown RBP8.09□□□□□ -1.11
VPS52-219ENST00000493379 U2AF1L4Q8WU68 220 aaKnown RBP8.09□□□□□ -1.11
VPS52-219ENST00000493379 NUDT12Q9BQG2 462 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 RNF208Q9H0X6 261 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 EHD4Q9H223 541 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 TTYH1Q9H313 450 aaPredicted RBP8.09□□□□□ -1.11
VPS52-219ENST00000493379 PRDM9Q9NQV7 894 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 ATP8A2Q9NTI2 1148 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 PPP4R2Q9NY27 417 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 PI4KBQ9UBF8 816 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 HERC5Q9UII4 1024 aaKnown RBP8.09□□□□□ -1.11
VPS52-219ENST00000493379 USTQ9Y2C2 406 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 MYH13Q9UKX3 1938 aa8.09□□□□□ -1.11
VPS52-219ENST00000493379 FLT1P17948 1338 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 MYH2Q9UKX2 1941 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 MANSC4A6NHS7 340 aaPredicted RBP8.08□□□□□ -1.12
VPS52-219ENST00000493379 GSG1L2A8MUP6 293 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 CHGBP05060 677 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 IREB2P48200 963 aaKnown RBP8.08□□□□□ -1.12
VPS52-219ENST00000493379 KCNH2Q12809 1159 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 SLFNL1Q499Z3 407 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 SBK1Q52WX2 424 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 TTC22Q5TAA0 569 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 DCAF15Q66K64 600 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 TATDN1Q6P1N9 297 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 NYAP1Q6ZVC0 841 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 TEX11Q8IYF3 940 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 ANKRD13AQ8IZ07 590 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 TGFBRAP1Q8WUH2 860 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 PAWRQ96IZ0 340 aaKnown RBP8.08□□□□□ -1.12
VPS52-219ENST00000493379 PTPN18Q99952 460 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 NOL10Q9BSC4 688 aaKnown RBP8.08□□□□□ -1.12
VPS52-219ENST00000493379 DCP1AQ9NPI6 582 aaPredicted RBP8.08□□□□□ -1.12
VPS52-219ENST00000493379 C11orf16Q9NQ32 467 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 HELLSQ9NRZ9 838 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 GINM1Q9NU53 330 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 GPSM3Q9Y4H4 160 aa8.08□□□□□ -1.12
VPS52-219ENST00000493379 LAMB1P07942 1786 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 PATL2C9JE40 543 aaKnown RBP8.07□□□□□ -1.12
VPS52-219ENST00000493379 PIK3CDO00329 1044 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 FOXP2O15409 715 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 CTNND1O60716 968 aaKnown RBP8.07□□□□□ -1.12
VPS52-219ENST00000493379 NEFLP07196 543 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 GSPT1P15170 499 aaKnown RBP8.07□□□□□ -1.12
VPS52-219ENST00000493379 GNAT2P19087 354 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 SDSP20132 328 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 TCP10Q12799 353 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 ALX1Q15699 326 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 TMEM31Q5JXX7 168 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 PDXDC2PQ6P474 469 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 LCORLQ8N3X6 602 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 MIGA1Q8NAN2 632 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 ARMC2Q8NEN0 867 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 PPM1EQ8WY54 764 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 GPKOWQ92917 476 aaPredicted RBP eCLIP8.07□□□□□ -1.12
VPS52-219ENST00000493379 ASB2Q96Q27 587 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 ZNF341Q9BYN7 854 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 CRNKL1Q9BZJ0 848 aaKnown RBP8.07□□□□□ -1.12
VPS52-219ENST00000493379 USP34Q70CQ2 3546 aa8.07□□□□□ -1.12
VPS52-219ENST00000493379 EPG5Q9HCE0 2579 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 HIP1O00291 1037 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 ATG7O95352 703 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 ZBTB48P10074 688 aaPredicted RBP8.06□□□□□ -1.12
VPS52-219ENST00000493379 INHBEP58166 350 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 NHLH1Q02575 133 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 PTK2Q05397 1052 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 MCMDC2Q4G0Z9 681 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 C12orf60Q5U649 245 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 TTC6Q86TZ1 520 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 KCTD12Q96CX2 325 aaKnown RBP8.06□□□□□ -1.12
VPS52-219ENST00000493379 CCDC136Q96JN2 1154 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 CLMNQ96JQ2 1002 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 OCSTAMPQ9BR26 566 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 UNC93B1Q9H1C4 597 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 DNAJC18Q9H819 358 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 ANGEL1Q9UNK9 670 aaKnown RBP8.06□□□□□ -1.12
VPS52-219ENST00000493379 SNCAIPQ9Y6H5 919 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 MYO5AQ9Y4I1 1855 aaKnown RBP8.06□□□□□ -1.12
VPS52-219ENST00000493379 ZFHX4Q86UP3 3567 aa8.06□□□□□ -1.12
VPS52-219ENST00000493379 MAST2Q6P0Q8 1798 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 GPAA1O43292 621 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 PRKAB2O43741 272 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 TLL1O43897 1013 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 MBD4O95243 580 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 SGPL1O95470 568 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 ADH1BP00325 375 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 FGRP09769 529 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 CAP2P40123 477 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 PLCD1P51178 756 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 PPATQ06203 517 aa8.05□□□□□ -1.12
VPS52-219ENST00000493379 PICALMQ13492 652 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms