RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 ZNF236Q9UL36 1845 aa20.66■□□□□ 0.9
ATG3-205ENST00000488910 NMT2O60551 498 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 PLA2G6O60733 806 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 COBLO75128 1261 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 IGHA2P01877 340 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 GSPT1P15170 499 aaKnown RBP20.65■□□□□ 0.9
ATG3-205ENST00000488910 SLC1A4P43007 532 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 HAND2P61296 217 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 RRP12Q5JTH9 1297 aaKnown RBP20.65■□□□□ 0.9
ATG3-205ENST00000488910 FAM160B2Q86V87 743 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 KIFC2Q96AC6 838 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 MMP19Q99542 508 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 OGDHLQ9ULD0 1010 aa20.65■□□□□ 0.9
ATG3-205ENST00000488910 ZNFX1Q9P2E3 1918 aaKnown RBP20.65■□□□□ 0.9
ATG3-205ENST00000488910 TMEM232C9JQI7 657 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 MCCP23508 829 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 STAT2P52630 851 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 OAZ1P54368 228 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 KCTD2Q14681 263 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 RCSD1Q6JBY9 416 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 NBPF3Q9H094 633 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 SLC38A10Q9HBR0 1119 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 CTNNA3Q9UI47 895 aa20.64■□□□□ 0.89
ATG3-205ENST00000488910 CCND3P30281 292 aaPredicted RBP20.63■□□□□ 0.89
ATG3-205ENST00000488910 SNRNP48Q6IEG0 339 aaKnown RBP20.63■□□□□ 0.89
ATG3-205ENST00000488910 NECAB2Q7Z6G3 386 aa20.63■□□□□ 0.89
ATG3-205ENST00000488910 DPF3Q92784 378 aa20.63■□□□□ 0.89
ATG3-205ENST00000488910 TTC14Q96N46 770 aa20.63■□□□□ 0.89
ATG3-205ENST00000488910 DIS3Q9Y2L1 958 aaKnown RBP20.63■□□□□ 0.89
ATG3-205ENST00000488910 MSCO60682 206 aa20.62■□□□□ 0.89
ATG3-205ENST00000488910 TOP1P11387 765 aaKnown RBP20.62■□□□□ 0.89
ATG3-205ENST00000488910 CYP2C19P33261 490 aa20.62■□□□□ 0.89
ATG3-205ENST00000488910 LHX8Q68G74 356 aa20.62■□□□□ 0.89
ATG3-205ENST00000488910 RUFY2Q8WXA3 655 aa20.62■□□□□ 0.89
ATG3-205ENST00000488910 ESR2Q92731 530 aa20.62■□□□□ 0.89
ATG3-205ENST00000488910 PAWRQ96IZ0 340 aaKnown RBP20.62■□□□□ 0.89
ATG3-205ENST00000488910 ISY1Q9ULR0 285 aaKnown RBP20.62■□□□□ 0.89
ATG3-205ENST00000488910 IMMTQ16891 758 aaKnown RBP20.61■□□□□ 0.89
ATG3-205ENST00000488910 TBC1D10CQ8IV04 446 aa20.61■□□□□ 0.89
ATG3-205ENST00000488910 CPXCR1Q8N123 301 aa20.61■□□□□ 0.89
ATG3-205ENST00000488910 DCAF4Q8WV16 495 aa20.61■□□□□ 0.89
ATG3-205ENST00000488910 MAML3Q96JK9 1138 aa20.61■□□□□ 0.89
ATG3-205ENST00000488910 RAD50Q92878 1312 aa20.6■□□□□ 0.89
ATG3-205ENST00000488910 IKQ13123 557 aaPredicted RBP20.6■□□□□ 0.89
ATG3-205ENST00000488910 ZNF792Q3KQV3 632 aa20.6■□□□□ 0.89
ATG3-205ENST00000488910 CCDC178Q5BJE1 867 aa20.6■□□□□ 0.89
ATG3-205ENST00000488910 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.6■□□□□ 0.89
ATG3-205ENST00000488910 TMEM47Q9BQJ4 181 aa20.6■□□□□ 0.89
ATG3-205ENST00000488910 RAVER2Q9HCJ3 691 aaKnown RBP20.6■□□□□ 0.89
ATG3-205ENST00000488910 FBXO40Q9UH90 709 aa20.6■□□□□ 0.89
ATG3-205ENST00000488910 RIPK3Q9Y572 518 aa20.6■□□□□ 0.89
ATG3-205ENST00000488910 CYBAP13498 195 aa20.59■□□□□ 0.89
ATG3-205ENST00000488910 CHMLP26374 656 aa20.59■□□□□ 0.89
ATG3-205ENST00000488910 CNGA1P29973 690 aa20.59■□□□□ 0.89
ATG3-205ENST00000488910 MNX1P50219 401 aaPredicted RBP20.59■□□□□ 0.89
ATG3-205ENST00000488910 KCTD1Q719H9 257 aa20.59■□□□□ 0.89
ATG3-205ENST00000488910 CHST13Q8NET6 341 aa20.59■□□□□ 0.89
ATG3-205ENST00000488910 DDX20Q9UHI6 824 aaKnown RBP20.59■□□□□ 0.89
ATG3-205ENST00000488910 NRBP1Q9UHY1 535 aa20.59■□□□□ 0.89
ATG3-205ENST00000488910 NR2E3Q9Y5X4 410 aa20.59■□□□□ 0.89
ATG3-205ENST00000488910 PGK2P07205 417 aa20.58■□□□□ 0.89
ATG3-205ENST00000488910 DGKHQ86XP1 1220 aa20.58■□□□□ 0.89
ATG3-205ENST00000488910 TRPV1Q8NER1 839 aa20.58■□□□□ 0.89
ATG3-205ENST00000488910 DIS3LQ8TF46 1054 aaKnown RBP20.58■□□□□ 0.89
ATG3-205ENST00000488910 DDX11Q96FC9 970 aa20.58■□□□□ 0.89
ATG3-205ENST00000488910 SLC4A3P48751 1232 aa20.57■□□□□ 0.88
ATG3-205ENST00000488910 TKFCQ3LXA3 575 aa20.57■□□□□ 0.88
ATG3-205ENST00000488910 IQCA1Q86XH1 822 aa20.57■□□□□ 0.88
ATG3-205ENST00000488910 MSL3Q8N5Y2 521 aaKnown RBP20.57■□□□□ 0.88
ATG3-205ENST00000488910 CHMP4CQ96CF2 233 aa20.57■□□□□ 0.88
ATG3-205ENST00000488910 TINF2Q9BSI4 451 aa20.57■□□□□ 0.88
ATG3-205ENST00000488910 C11orf49Q9H6J7 331 aa20.57■□□□□ 0.88
ATG3-205ENST00000488910 PRR12Q9ULL5 1215 aa20.57■□□□□ 0.88
ATG3-205ENST00000488910 NEDD4P46934 1319 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 LAMA4Q16363 1823 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 DNAJC25-GNG10A0A024R161 153 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 H0YGN5 161 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 SEPT4O43236 478 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 CCDC96Q2M329 555 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 BTNL9Q6UXG8 535 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 KRT23Q9C075 422 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 IL25Q9H293 177 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 CNNM2Q9H8M5 875 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 MTMR7Q9Y216 660 aa20.56■□□□□ 0.88
ATG3-205ENST00000488910 EVI5O60447 810 aa20.55■□□□□ 0.88
ATG3-205ENST00000488910 KDM4AO75164 1064 aa20.55■□□□□ 0.88
ATG3-205ENST00000488910 CENPQQ7L2Z9 268 aaPredicted RBP20.55■□□□□ 0.88
ATG3-205ENST00000488910 ANKRD35Q8N283 1001 aa20.55■□□□□ 0.88
ATG3-205ENST00000488910 ANKS1AQ92625 1134 aa20.55■□□□□ 0.88
ATG3-205ENST00000488910 PLXNA1Q9UIW2 1896 aa20.55■□□□□ 0.88
ATG3-205ENST00000488910 ZNF536O15090 1300 aa20.54■□□□□ 0.88
ATG3-205ENST00000488910 PDHBP11177 359 aa20.54■□□□□ 0.88
ATG3-205ENST00000488910 PRAMEF19Q5SWL8 479 aa20.54■□□□□ 0.88
ATG3-205ENST00000488910 ZNF467Q7Z7K2 595 aaPredicted RBP20.54■□□□□ 0.88
ATG3-205ENST00000488910 AGBL1Q96MI9 1066 aa20.54■□□□□ 0.88
ATG3-205ENST00000488910 ACAD9Q9H845 621 aa20.54■□□□□ 0.88
ATG3-205ENST00000488910 ZSWIM5Q9P217 1185 aa20.54■□□□□ 0.88
ATG3-205ENST00000488910 B4E1Z4 1266 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 SGSM2O43147 1006 aa20.53■□□□□ 0.88
ATG3-205ENST00000488910 SNHG28P0DPA3 235 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms