RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 ZBED4O75132 1171 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 MCCP23508 829 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 COPB2P35606 906 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 SLC1A4P43007 532 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
SPEN-205ENST00000487496 KCTD2Q14681 263 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 AKNAD1Q5T1N1 836 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 TTC22Q5TAA0 569 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 NECAB2Q7Z6G3 386 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 PIAS4Q8N2W9 510 aaPredicted RBP13.54□□□□□ -0.24
SPEN-205ENST00000487496 DIS3LQ8TF46 1054 aaKnown RBP13.54□□□□□ -0.24
SPEN-205ENST00000487496 MMP19Q99542 508 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 SLC38A10Q9HBR0 1119 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 MYH4Q9Y623 1939 aa13.54□□□□□ -0.24
SPEN-205ENST00000487496 ZNF213O14771 459 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
SPEN-205ENST00000487496 STAT2P52630 851 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
SPEN-205ENST00000487496 MFSD6Q6ZSS7 791 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 TBC1D10CQ8IV04 446 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 CPXCR1Q8N123 301 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 TRPV1Q8NER1 839 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 STAG1Q8WVM7 1258 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 MAML3Q96JK9 1138 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 DSCC1Q9BVC3 393 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 RNF41Q9H4P4 317 aaPredicted RBP13.53□□□□□ -0.24
SPEN-205ENST00000487496 RAVER2Q9HCJ3 691 aaKnown RBP13.53□□□□□ -0.24
SPEN-205ENST00000487496 TCP11L1Q9NUJ3 509 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 ISY1Q9ULR0 285 aaKnown RBP13.53□□□□□ -0.24
SPEN-205ENST00000487496 RIPK3Q9Y572 518 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 CTDP1Q9Y5B0 961 aaPredicted RBP13.53□□□□□ -0.24
SPEN-205ENST00000487496 ZNF236Q9UL36 1845 aa13.53□□□□□ -0.24
SPEN-205ENST00000487496 H0YGN5 161 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 PGK2P07205 417 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 CYBAP13498 195 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 SLC4A3P48751 1232 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 OAZ1P54368 228 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 RCSD1Q6JBY9 416 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 KCTD1Q719H9 257 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 RASGRP2Q7LDG7 609 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 FAM160B2Q86V87 743 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 CHURC1Q8WUH1 139 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 TMEM47Q9BQJ4 181 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 IL25Q9H293 177 aa13.52□□□□□ -0.25
SPEN-205ENST00000487496 DDX20Q9UHI6 824 aaKnown RBP13.52□□□□□ -0.25
SPEN-205ENST00000487496 COL11A1P12107 1806 aaPredicted RBP13.52□□□□□ -0.25
SPEN-205ENST00000487496 MSCO60682 206 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 PLA2G6O60733 806 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 FDX1P10109 184 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 TOP1P11387 765 aaKnown RBP13.51□□□□□ -0.25
SPEN-205ENST00000487496 CNGA1P29973 690 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 ZNF792Q3KQV3 632 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 PRAMEF19Q5SWL8 479 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 C11orf49Q9H6J7 331 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 MTMR7Q9Y216 660 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 DIS3Q9Y2L1 958 aaKnown RBP13.51□□□□□ -0.25
SPEN-205ENST00000487496 NR2E3Q9Y5X4 410 aa13.51□□□□□ -0.25
SPEN-205ENST00000487496 NEDD4P46934 1319 aa13.5□□□□□ -0.25
SPEN-205ENST00000487496 IKQ13123 557 aaPredicted RBP13.5□□□□□ -0.25
SPEN-205ENST00000487496 DCAF4Q8WV16 495 aa13.5□□□□□ -0.25
SPEN-205ENST00000487496 ESR2Q92731 530 aa13.5□□□□□ -0.25
SPEN-205ENST00000487496 DDX11Q96FC9 970 aa13.5□□□□□ -0.25
SPEN-205ENST00000487496 TTC14Q96N46 770 aa13.5□□□□□ -0.25
SPEN-205ENST00000487496 TINF2Q9BSI4 451 aa13.5□□□□□ -0.25
SPEN-205ENST00000487496 CTNNA3Q9UI47 895 aa13.5□□□□□ -0.25
SPEN-205ENST00000487496 PRR12Q9ULL5 1215 aa13.5□□□□□ -0.25
SPEN-205ENST00000487496 ZNF536O15090 1300 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 DNAJC25-GNG10A0A024R161 153 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 EVI5O60447 810 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 COL6A1P12109 1028 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 CHMLP26374 656 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 NT5C2P49902 561 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 IMMTQ16891 758 aaKnown RBP13.49□□□□□ -0.25
SPEN-205ENST00000487496 CCDC96Q2M329 555 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPEN-205ENST00000487496 CHST13Q8NET6 341 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 FBXO40Q9UH90 709 aa13.49□□□□□ -0.25
SPEN-205ENST00000487496 PFASO15067 1338 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 RAD50Q92878 1312 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 SEPT4O43236 478 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 KDM4AO75164 1064 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 SNAP25P60880 206 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 TTBK2Q6IQ55 1244 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 DGKHQ86XP1 1220 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 ANKRD35Q8N283 1001 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 RUFY2Q8WXA3 655 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 AGBL1Q96MI9 1066 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 ZKSCAN3Q9BRR0 538 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 HOMER2Q9NSB8 354 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 NRBP1Q9UHY1 535 aa13.48□□□□□ -0.25
SPEN-205ENST00000487496 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
SPEN-205ENST00000487496 FRMPD2Q68DX3 1309 aaPredicted RBP13.47□□□□□ -0.25
SPEN-205ENST00000487496 CEP290O15078 2479 aa13.47□□□□□ -0.25
SPEN-205ENST00000487496 B4E1Z4 1266 aa13.47□□□□□ -0.25
SPEN-205ENST00000487496 PDHBP11177 359 aa13.47□□□□□ -0.25
SPEN-205ENST00000487496 SLC16A2P36021 539 aa13.47□□□□□ -0.25
SPEN-205ENST00000487496 ANO1Q5XXA6 986 aa13.47□□□□□ -0.25
SPEN-205ENST00000487496 CCDC174Q6PII3 467 aa13.47□□□□□ -0.25
SPEN-205ENST00000487496 BTNL9Q6UXG8 535 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms