RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 CDKL5O76039 1030 aa19.56■□□□□ 0.72
NF1-211ENST00000487476 FOSBP53539 338 aa19.56■□□□□ 0.72
NF1-211ENST00000487476 SNAPC2Q13487 334 aa19.56■□□□□ 0.72
NF1-211ENST00000487476 HOMER1Q86YM7 354 aa19.56■□□□□ 0.72
NF1-211ENST00000487476 KIFC2Q96AC6 838 aa19.56■□□□□ 0.72
NF1-211ENST00000487476 LZTS2Q9BRK4 669 aa19.56■□□□□ 0.72
NF1-211ENST00000487476 SPZ1Q9BXG8 430 aa19.56■□□□□ 0.72
NF1-211ENST00000487476 STAT2P52630 851 aa19.55■□□□□ 0.72
NF1-211ENST00000487476 PKN1Q16512 942 aa19.55■□□□□ 0.72
NF1-211ENST00000487476 BTNL9Q6UXG8 535 aa19.55■□□□□ 0.72
NF1-211ENST00000487476 PIGSQ96S52 555 aa19.55■□□□□ 0.72
NF1-211ENST00000487476 GJB4Q9NTQ9 266 aa19.55■□□□□ 0.72
NF1-211ENST00000487476 SYDE2Q5VT97 1194 aa19.55■□□□□ 0.72
NF1-211ENST00000487476 PRR12Q9ULL5 1215 aa19.55■□□□□ 0.72
NF1-211ENST00000487476 PRPF3O43395 683 aaKnown RBP19.54■□□□□ 0.72
NF1-211ENST00000487476 FLOT1O75955 427 aa19.54■□□□□ 0.72
NF1-211ENST00000487476 APLP1P51693 650 aa19.54■□□□□ 0.72
NF1-211ENST00000487476 GPAT2Q6NUI2 795 aa19.54■□□□□ 0.72
NF1-211ENST00000487476 FEM1BQ9UK73 627 aa19.54■□□□□ 0.72
NF1-211ENST00000487476 ZBTB48P10074 688 aaPredicted RBP19.54■□□□□ 0.72
NF1-211ENST00000487476 CATSPERGQ6ZRH7 1159 aa19.54■□□□□ 0.72
NF1-211ENST00000487476 TRIM22Q8IYM9 498 aa19.54■□□□□ 0.72
NF1-211ENST00000487476 PROCA1Q8NCQ7 364 aaPredicted RBP19.54■□□□□ 0.72
NF1-211ENST00000487476 BRI3BPQ8WY22 251 aa19.54■□□□□ 0.72
NF1-211ENST00000487476 RNF26Q9BY78 433 aaPredicted RBP19.54■□□□□ 0.72
NF1-211ENST00000487476 FAM155AB1AL88 458 aaPredicted RBP19.53■□□□□ 0.72
NF1-211ENST00000487476 GTF2A2P52657 109 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 HMGN5P82970 282 aaKnown RBP19.53■□□□□ 0.72
NF1-211ENST00000487476 HTRA3P83110 453 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 GRM1Q13255 1194 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 CHURC1Q8WUH1 139 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 PCNTO95613 3336 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 PTPRFP10586 1907 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 CCL15-CCL14A0A0B4J2E2 113 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 SLC10A3P09131 477 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 TAL1P17542 331 aaPredicted RBP19.53■□□□□ 0.72
NF1-211ENST00000487476 SMARCA1P28370 1054 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 CCL15Q16663 113 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 OTUD7BQ6GQQ9 843 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 FAM184AQ8NB25 1140 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 SHISA4Q96DD7 197 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 SLF1Q9BQI6 1058 aa19.53■□□□□ 0.72
NF1-211ENST00000487476 USP17L15C9J2P7 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 USP17L13C9JLJ4 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 USP17L11C9JVI0 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 USP17L18D6R9N7 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 USP17L22D6RA61 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 USP17L17D6RBQ6 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 USP17L19D6RCP7 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 USP17L20D6RJB6 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 PPP1R11O60927 126 aaPredicted RBP19.52■□□□□ 0.72
NF1-211ENST00000487476 AKAP17AQ02040 695 aaKnown RBP19.52■□□□□ 0.72
NF1-211ENST00000487476 USP17L24Q0WX57 530 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 CYP4F22Q6NT55 531 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 PAXIP1Q6ZW49 1069 aaPredicted RBP19.52■□□□□ 0.72
NF1-211ENST00000487476 FASTKD5Q7L8L6 764 aaKnown RBP19.52■□□□□ 0.72
NF1-211ENST00000487476 MTMR8Q96EF0 704 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 RRP36Q96EU6 259 aaKnown RBP19.52■□□□□ 0.72
NF1-211ENST00000487476 ZIC5Q96T25 663 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 AGTPBP1Q9UPW5 1226 aa19.52■□□□□ 0.72
NF1-211ENST00000487476 STK36Q9NRP7 1315 aa19.52■□□□□ 0.71
NF1-211ENST00000487476 PLA2G6O60733 806 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 CETPP11597 493 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 DDIT3P35638 169 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 PKP1Q13835 747 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 FAM160B2Q86V87 743 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 PRPF38AQ8NAV1 312 aaKnown RBP19.51■□□□□ 0.71
NF1-211ENST00000487476 GPKOWQ92917 476 aaPredicted RBP eCLIP19.51■□□□□ 0.71
NF1-211ENST00000487476 PTPN18Q99952 460 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 ALG1Q9BT22 464 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 CREBZFQ9NS37 354 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 BTBD19C9JJ37 291 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 DEXIO95424 95 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 CDC37Q16543 378 aaPredicted RBP19.51■□□□□ 0.71
NF1-211ENST00000487476 QRICH1Q2TAL8 776 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 ATG4CQ96DT6 458 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 PPP1R9AQ9ULJ8 1098 aa19.51■□□□□ 0.71
NF1-211ENST00000487476 PEX10O60683 326 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 GUCY1B3Q02153 619 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 PFKFB3Q16875 520 aaPredicted RBP19.5■□□□□ 0.71
NF1-211ENST00000487476 POTEEQ6S8J3 1075 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 CWC22Q9HCG8 908 aaKnown RBP19.5■□□□□ 0.71
NF1-211ENST00000487476 ZBTB5O15062 677 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 SCG2P13521 617 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 SYT1P21579 422 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 HOXA7P31268 230 aaPredicted RBP19.5■□□□□ 0.71
NF1-211ENST00000487476 COG2Q14746 738 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 LARP1BQ659C4 914 aaKnown RBP19.5■□□□□ 0.71
NF1-211ENST00000487476 CCDC174Q6PII3 467 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 HHIPL1Q96JK4 782 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 P2RX7Q99572 595 aaKnown RBP19.5■□□□□ 0.71
NF1-211ENST00000487476 ASCC2Q9H1I8 757 aaPredicted RBP19.5■□□□□ 0.71
NF1-211ENST00000487476 VPS54Q9P1Q0 977 aa19.5■□□□□ 0.71
NF1-211ENST00000487476 PNMA6FA0A0J9YX94 578 aa19.49■□□□□ 0.71
NF1-211ENST00000487476 WWC2Q6AWC2 1192 aa19.49■□□□□ 0.71
NF1-211ENST00000487476 TYW1BQ6NUM6 668 aa19.49■□□□□ 0.71
NF1-211ENST00000487476 HEATR3Q7Z4Q2 680 aa19.49■□□□□ 0.71
NF1-211ENST00000487476 FAM43AQ8N2R8 423 aa19.49■□□□□ 0.71
NF1-211ENST00000487476 COA7Q96BR5 231 aa19.49■□□□□ 0.71
NF1-211ENST00000487476 SEC63Q9UGP8 760 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms