RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 NDUFB10O96000 172 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 ADORA2AP29274 412 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 COPB2P35606 906 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 PPP4R3BQ5MIZ7 849 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 OLFML2BQ68BL8 750 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 POTEGQ6S5H5 508 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 NECAB2Q7Z6G3 386 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 RIOX2Q8IUF8 465 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 GMCL1P1Q8NEA9 526 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 REPS2Q8NFH8 660 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 NPLOC4Q8TAT6 608 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 PAWRQ96IZ0 340 aaKnown RBP17.13■□□□□ 0.33
CLDN11-207ENST00000486975 SLF1Q9BQI6 1058 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 FLRT1Q9NZU1 646 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 CLIP2Q9UDT6 1046 aa17.13■□□□□ 0.33
CLDN11-207ENST00000486975 ZNF214Q9UL59 606 aaPredicted RBP17.13■□□□□ 0.33
CLDN11-207ENST00000486975 H0YGN5 161 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 TSPY3P0CV98 308 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 TSPY8P0CW00 308 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 PLS1Q14651 629 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 MCMDC2Q4G0Z9 681 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 B4GALNT3Q6L9W6 998 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 DPP9Q86TI2 863 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 PLEKHM2Q8IWE5 1019 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 DPF3Q92784 378 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 FAM227BQ96M60 508 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 NBPF3Q9H094 633 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 SLC5A4Q9NY91 659 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 NR2E3Q9Y5X4 410 aa17.12■□□□□ 0.33
CLDN11-207ENST00000486975 A0A0D9SFI3 127 aa17.11■□□□□ 0.33
CLDN11-207ENST00000486975 MSCO60682 206 aa17.11■□□□□ 0.33
CLDN11-207ENST00000486975 FGRP09769 529 aa17.11■□□□□ 0.33
CLDN11-207ENST00000486975 FCER1AP12319 257 aa17.11■□□□□ 0.33
CLDN11-207ENST00000486975 CCND3P30281 292 aaPredicted RBP17.11■□□□□ 0.33
CLDN11-207ENST00000486975 TFAP4Q01664 338 aa17.11■□□□□ 0.33
CLDN11-207ENST00000486975 LCE2DQ5TA82 110 aaPredicted RBP17.11■□□□□ 0.33
CLDN11-207ENST00000486975 VPS53Q5VIR6 699 aa17.11■□□□□ 0.33
CLDN11-207ENST00000486975 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
CLDN11-207ENST00000486975 PRPF38AQ8NAV1 312 aaKnown RBP17.11■□□□□ 0.33
CLDN11-207ENST00000486975 SUPT16HQ9Y5B9 1047 aaKnown RBP17.11■□□□□ 0.33
CLDN11-207ENST00000486975 TRIM6-TRIM34B2RNG4 842 aa17.1■□□□□ 0.33
CLDN11-207ENST00000486975 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
CLDN11-207ENST00000486975 ORC4O43929 436 aa17.1■□□□□ 0.33
CLDN11-207ENST00000486975 RAD21O60216 631 aa17.1■□□□□ 0.33
CLDN11-207ENST00000486975 STAT3P40763 770 aa17.1■□□□□ 0.33
CLDN11-207ENST00000486975 NMIQ13287 307 aaPredicted RBP17.1■□□□□ 0.33
CLDN11-207ENST00000486975 PDAP1Q13442 181 aaKnown RBP17.1■□□□□ 0.33
CLDN11-207ENST00000486975 DIS3LQ8TF46 1054 aaKnown RBP17.1■□□□□ 0.33
CLDN11-207ENST00000486975 NUP88Q99567 741 aaPredicted RBP17.1■□□□□ 0.33
CLDN11-207ENST00000486975 TEX13BQ9BXU2 312 aa17.1■□□□□ 0.33
CLDN11-207ENST00000486975 COBLO75128 1261 aa17.09■□□□□ 0.33
CLDN11-207ENST00000486975 CYBAP13498 195 aa17.09■□□□□ 0.33
CLDN11-207ENST00000486975 CYP2C19P33261 490 aa17.09■□□□□ 0.33
CLDN11-207ENST00000486975 FAM47AQ5JRC9 791 aa17.09■□□□□ 0.33
CLDN11-207ENST00000486975 HABP4Q5JVS0 413 aaKnown RBP17.09■□□□□ 0.33
CLDN11-207ENST00000486975 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
CLDN11-207ENST00000486975 GMCL1Q96IK5 515 aa17.09■□□□□ 0.33
CLDN11-207ENST00000486975 FEM1BQ9UK73 627 aa17.09■□□□□ 0.33
CLDN11-207ENST00000486975 CCDC171Q6TFL3 1326 aa17.09■□□□□ 0.33
CLDN11-207ENST00000486975 EVI5O60447 810 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 FGAP02671 866 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 HSPD1P10809 573 aaKnown RBP17.08■□□□□ 0.32
CLDN11-207ENST00000486975 COL6A1P12109 1028 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 SDSP20132 328 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 NOVP48745 357 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 MFAP1P55081 439 aaKnown RBP17.08■□□□□ 0.32
CLDN11-207ENST00000486975 CTDSPL2Q05D32 466 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 KCTD2Q14681 263 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.32
CLDN11-207ENST00000486975 RILPL2Q969X0 211 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 MAML3Q96JK9 1138 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 C11orf49Q9H6J7 331 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 DDX20Q9UHI6 824 aaKnown RBP17.08■□□□□ 0.32
CLDN11-207ENST00000486975 NRBP1Q9UHY1 535 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 DIS3Q9Y2L1 958 aaKnown RBP17.08■□□□□ 0.32
CLDN11-207ENST00000486975 MYH4Q9Y623 1939 aa17.08■□□□□ 0.32
CLDN11-207ENST00000486975 COL11A1P12107 1806 aaPredicted RBP17.07■□□□□ 0.32
CLDN11-207ENST00000486975 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 FDX1P10109 184 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 BMP3P12645 472 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 OAZ1P54368 228 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 SLFN13Q68D06 897 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLDN11-207ENST00000486975 TRPV1Q8NER1 839 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 MMP19Q99542 508 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 IL17RBQ9NRM6 502 aa17.07■□□□□ 0.32
CLDN11-207ENST00000486975 HIP1O00291 1037 aa17.06■□□□□ 0.32
CLDN11-207ENST00000486975 PLA2G6O60733 806 aa17.06■□□□□ 0.32
CLDN11-207ENST00000486975 ZBED4O75132 1171 aa17.06■□□□□ 0.32
CLDN11-207ENST00000486975 PCP11498 1178 aaKnown RBP17.06■□□□□ 0.32
CLDN11-207ENST00000486975 PDCD7Q8N8D1 485 aaKnown RBP17.06■□□□□ 0.32
CLDN11-207ENST00000486975 TACC3Q9Y6A5 838 aa17.06■□□□□ 0.32
CLDN11-207ENST00000486975 PFASO15067 1338 aa17.05■□□□□ 0.32
CLDN11-207ENST00000486975 NT5C2P49902 561 aa17.05■□□□□ 0.32
CLDN11-207ENST00000486975 ZNF792Q3KQV3 632 aa17.05■□□□□ 0.32
CLDN11-207ENST00000486975 SNRNP48Q6IEG0 339 aaKnown RBP17.05■□□□□ 0.32
CLDN11-207ENST00000486975 FAM160B2Q86V87 743 aa17.05■□□□□ 0.32
CLDN11-207ENST00000486975 KIFC2Q96AC6 838 aa17.05■□□□□ 0.32
CLDN11-207ENST00000486975 PRO3102Q9H379 93 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms