RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 TMX2Q9Y320 296 aa8.07□□□□□ -1.12
UBR4-214ENST00000486515 SIPA1L1O43166 1804 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 IGKV6D-41A0A0C4DH26 115 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 SPDYE5A6NIY4 337 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 KLRF2D3W0D1 207 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 CXCL11O14625 94 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 WDR46O15213 610 aaKnown RBP8.06□□□□□ -1.12
UBR4-214ENST00000486515 PFKFB2O60825 505 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 SLURP2P0DP57 97 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 CETPP11597 493 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 BMP3P12645 472 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 RXRAP19793 462 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 PDCP20941 246 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 OSBPP22059 807 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 STAT2P52630 851 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 BACE1P56817 501 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 IRX3P78415 501 aaPredicted RBP8.06□□□□□ -1.12
UBR4-214ENST00000486515 PPIL2Q13356 520 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 DLK2Q6UY11 383 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.06□□□□□ -1.12
UBR4-214ENST00000486515 FAM160B2Q86V87 743 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 SPICE1Q8N0Z3 855 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 GTF3C6Q969F1 213 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
UBR4-214ENST00000486515 GMCL1Q96IK5 515 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 IPO9Q96P70 1041 aaKnown RBP8.06□□□□□ -1.12
UBR4-214ENST00000486515 P2RX7Q99572 595 aaKnown RBP8.06□□□□□ -1.12
UBR4-214ENST00000486515 LLPHQ9BRT6 129 aaKnown RBP8.06□□□□□ -1.12
UBR4-214ENST00000486515 MYL10Q9BUA6 226 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 CWC22Q9HCG8 908 aaKnown RBP8.06□□□□□ -1.12
UBR4-214ENST00000486515 GPCPD1Q9NPB8 672 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 FEM1BQ9UK73 627 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 PNMA3Q9UL41 463 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 PNMA2Q9UL42 364 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 NR2E3Q9Y5X4 410 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 TACC3Q9Y6A5 838 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 SNCAIPQ9Y6H5 919 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 EYSQ5T1H1 3165 aa8.06□□□□□ -1.12
UBR4-214ENST00000486515 MYH1P12882 1939 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 RBBP6Q7Z6E9 1792 aaKnown RBP8.05□□□□□ -1.12
UBR4-214ENST00000486515 TMEM232C9JQI7 657 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 H3BQV1 296 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 ZBED4O75132 1171 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 ZBTB48P10074 688 aaPredicted RBP8.05□□□□□ -1.12
UBR4-214ENST00000486515 FDX1P10109 184 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 PDHBP11177 359 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 GUCY1A2P33402 732 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 HMGCS2P54868 508 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 EVCP57679 992 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 SREBF2Q12772 1141 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 GNL2Q13823 731 aaKnown RBP8.05□□□□□ -1.12
UBR4-214ENST00000486515 GRM4Q14833 912 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 ME3Q16798 604 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 LDLRAD1Q5T700 205 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 MOB2Q70IA6 237 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 OTOP1Q7RTM1 612 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 RAB11FIP4Q86YS3 637 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 CLEC10AQ8IUN9 316 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 CCAR1Q8IX12 1150 aaKnown RBP8.05□□□□□ -1.12
UBR4-214ENST00000486515 CCDC82Q8N4S0 544 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 NECAB1Q8N987 351 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 SPRYD3Q8NCJ5 442 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 CCDC12Q8WUD4 166 aaPredicted RBP8.05□□□□□ -1.12
UBR4-214ENST00000486515 INTS4Q96HW7 963 aaKnown RBP8.05□□□□□ -1.12
UBR4-214ENST00000486515 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.05□□□□□ -1.12
UBR4-214ENST00000486515 SLC26A6Q9BXS9 759 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 VAT1LQ9HCJ6 419 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 BRMS1Q9HCU9 246 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 GPHNQ9NQX3 736 aaPredicted RBP8.05□□□□□ -1.12
UBR4-214ENST00000486515 BRPF3Q9ULD4 1205 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 AFG3L2Q9Y4W6 797 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 PKD1L2Q7Z442 2459 aa8.05□□□□□ -1.12
UBR4-214ENST00000486515 FRMPD2Q68DX3 1309 aaPredicted RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 MYH8P13535 1937 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 MANSC4A6NHS7 340 aaPredicted RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L15C9J2P7 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L13C9JLJ4 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L11C9JVI0 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L18D6R9N7 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L22D6RA61 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L17D6RBQ6 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L19D6RCP7 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L20D6RJB6 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 IRF6O14896 467 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 FLOT1O75955 427 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 DEXIO95424 95 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 NDUFB10O96000 172 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 GOLGA8HP0CJ92 632 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 SMARCA1P28370 1054 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 NOVP48745 357 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 INHBEP58166 350 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 ZNF543Q08ER8 600 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 USP17L24Q0WX57 530 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 SCRN1Q12765 414 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 TROAPQ12815 778 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 MKRN3Q13064 507 aaKnown RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 RRP1BQ14684 758 aaKnown RBP8.04□□□□□ -1.12
UBR4-214ENST00000486515 SAFBQ15424 915 aaKnown RBP eCLIP8.04□□□□□ -1.12
UBR4-214ENST00000486515 FAM83BQ5T0W9 1011 aa8.04□□□□□ -1.12
UBR4-214ENST00000486515 KCTD1Q719H9 257 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms