RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 OAZ1P54368 228 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 MAMDC4Q6UXC1 1216 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 NAPBQ9H115 298 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 SLC38A10Q9HBR0 1119 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 SYNGAP1Q96PV0 1343 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 LTBP2Q14767 1821 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 ATN1P54259 1190 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-206ENST00000484733 PPARAQ07869 468 aa13.64□□□□□ -0.23
SCFD1-206ENST00000484733 SNRNP48Q6IEG0 339 aaKnown RBP13.64□□□□□ -0.23
SCFD1-206ENST00000484733 LBHD1Q9BQE6 289 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-206ENST00000484733 PRDM1O75626 825 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 RARBP10826 455 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 HDAC1Q13547 482 aaPredicted RBP13.63□□□□□ -0.23
SCFD1-206ENST00000484733 ANO1Q5XXA6 986 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 CHST13Q8NET6 341 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 FBXO40Q9UH90 709 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCFD1-206ENST00000484733 PLA2G6O60733 806 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 TSPY3P0CV98 308 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 TSPY8P0CW00 308 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 BMP3P12645 472 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 AKR1A1P14550 325 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 ADCYAP1R1P41586 468 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 MDM2Q00987 491 aaPredicted RBP13.63□□□□□ -0.23
SCFD1-206ENST00000484733 FAM47AQ5JRC9 791 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 SLFN13Q68D06 897 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 XPNPEP3Q9NQH7 507 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 PRKAG2Q9UGJ0 569 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 ANAPC4Q9UJX5 808 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 RIPK3Q9Y572 518 aa13.63□□□□□ -0.23
SCFD1-206ENST00000484733 TFAP4Q01664 338 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 ALX1Q15699 326 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 RNF180Q86T96 592 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 EVI5LQ96CN4 794 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 DDX11Q96FC9 970 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 GMCL1Q96IK5 515 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 TSEN34Q9BSV6 310 aaKnown RBP13.62□□□□□ -0.23
SCFD1-206ENST00000484733 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
SCFD1-206ENST00000484733 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 ATP11BQ9Y2G3 1177 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 CTDP1Q9Y5B0 961 aaPredicted RBP13.62□□□□□ -0.23
SCFD1-206ENST00000484733 SMCHD1A6NHR9 2005 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 FOXP2O15409 715 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 TAL1P17542 331 aaPredicted RBP13.62□□□□□ -0.23
SCFD1-206ENST00000484733 AAMPQ13685 434 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 FAM160B2Q86V87 743 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 KIFC2Q96AC6 838 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 HELLSQ9NRZ9 838 aa13.62□□□□□ -0.23
SCFD1-206ENST00000484733 SNAI1O95863 264 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-206ENST00000484733 NOVP48745 357 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 TRIM60Q495X7 471 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 ANKRD45Q5TZF3 282 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 FAM109BQ6ICB4 259 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-206ENST00000484733 LRRC47Q8N1G4 583 aaKnown RBP13.61□□□□□ -0.23
SCFD1-206ENST00000484733 CHURC1Q8WUH1 139 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 STAG1Q8WVM7 1258 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 CRBNQ96SW2 442 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 RAVER2Q9HCJ3 691 aaKnown RBP13.61□□□□□ -0.23
SCFD1-206ENST00000484733 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 ADAMTS4O75173 837 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 FGRP09769 529 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 TKFCQ3LXA3 575 aa13.61□□□□□ -0.23
SCFD1-206ENST00000484733 PDE1AP54750 535 aa13.6□□□□□ -0.23
SCFD1-206ENST00000484733 CPXCR1Q8N123 301 aa13.6□□□□□ -0.23
SCFD1-206ENST00000484733 KLHDC9Q8NEP7 349 aa13.6□□□□□ -0.23
SCFD1-206ENST00000484733 PDLIM7Q9NR12 457 aa13.6□□□□□ -0.23
SCFD1-206ENST00000484733 ORC4O43929 436 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 DEFB123Q8N688 67 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 FGD4Q96M96 766 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 MTMR10Q9NXD2 777 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 MOXD2PA6NHM9 499 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 TMEM232C9JQI7 657 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 DUSP11O75319 330 aaKnown RBP13.59□□□□□ -0.23
SCFD1-206ENST00000484733 PGK1P00558 417 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 STAT2P52630 851 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 RCSD1Q6JBY9 416 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 ANKRD35Q8N283 1001 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 FERMT2Q96AC1 680 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 ABHD16BQ9H3Z7 469 aa13.59□□□□□ -0.23
SCFD1-206ENST00000484733 MYCNP04198 464 aaPredicted RBP13.58□□□□□ -0.23
SCFD1-206ENST00000484733 CST5P28325 142 aaPredicted RBP13.58□□□□□ -0.23
SCFD1-206ENST00000484733 TLE2Q04725 743 aa13.58□□□□□ -0.23
SCFD1-206ENST00000484733 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.23
SCFD1-206ENST00000484733 ACVR2BQ13705 512 aa13.58□□□□□ -0.23
SCFD1-206ENST00000484733 CCSAPQ6IQ19 270 aaPredicted RBP13.58□□□□□ -0.23
SCFD1-206ENST00000484733 UPF3AQ9H1J1 476 aaKnown RBP13.58□□□□□ -0.23
SCFD1-206ENST00000484733 IL17RBQ9NRM6 502 aa13.58□□□□□ -0.23
SCFD1-206ENST00000484733 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.58□□□□□ -0.23
SCFD1-206ENST00000484733 TACC3Q9Y6A5 838 aa13.58□□□□□ -0.23
SCFD1-206ENST00000484733 ZNF536O15090 1300 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 A0A1W2PQ45 241 aaPredicted RBP13.58□□□□□ -0.24
SCFD1-206ENST00000484733 A0A1W2PQY0 241 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 TRIM43BA6NCK2 446 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 TSPY2A6NKD2 308 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 SLC1A4P43007 532 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 NKX3-2P78367 333 aa13.58□□□□□ -0.24
SCFD1-206ENST00000484733 TRIM43Q96BQ3 446 aaPredicted RBP13.58□□□□□ -0.24
SCFD1-206ENST00000484733 TOX2Q96NM4 488 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms