RNA–Protein interactions for RNA: ENST00000481965.6

SEC22A-207, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3 BASIC

Gene SEC22A, Length 673 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-207ENST00000481965 PRRT3Q5FWE3 981 aa9.05□□□□□ -0.96
SEC22A-207ENST00000481965 GPAT2Q6NUI2 795 aa9.05□□□□□ -0.96
SEC22A-207ENST00000481965 FIBCD1Q8N539 461 aa9.05□□□□□ -0.96
SEC22A-207ENST00000481965 DDX1Q92499 740 aaKnown RBP9.05□□□□□ -0.96
SEC22A-207ENST00000481965 SCLYQ96I15 445 aa9.05□□□□□ -0.96
SEC22A-207ENST00000481965 C1GALT1Q9NS00 363 aa9.05□□□□□ -0.96
SEC22A-207ENST00000481965 THRAP3Q9Y2W1 955 aaKnown RBP9.05□□□□□ -0.96
SEC22A-207ENST00000481965 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.04□□□□□ -0.96
SEC22A-207ENST00000481965 GAS2O43903 313 aaKnown RBP9.04□□□□□ -0.96
SEC22A-207ENST00000481965 GLB1P16278 677 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 ETV3P41162 512 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 PPP2R5DQ14738 602 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 POMZP3Q6PJE2 187 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 NOL8Q76FK4 1167 aaKnown RBP9.04□□□□□ -0.96
SEC22A-207ENST00000481965 TMC3Q7Z5M5 1100 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 TMEM145Q8NBT3 493 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 NKX2-4Q9H2Z4 354 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 GFOD1Q9NXC2 390 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 CHPF2Q9P2E5 772 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 NDOR1Q9UHB4 597 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 MINPP1Q9UNW1 487 aa9.04□□□□□ -0.96
SEC22A-207ENST00000481965 SART1O43290 800 aaKnown RBP9.03□□□□□ -0.96
SEC22A-207ENST00000481965 VAMP4O75379 141 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 EYA4O95677 639 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 GABREP78334 506 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 MAP4K2Q12851 820 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 MAP7Q14244 749 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 ZNF460Q14592 562 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 PRSS53Q2L4Q9 553 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 NOL9Q5SY16 702 aaKnown RBP9.03□□□□□ -0.96
SEC22A-207ENST00000481965 SLC35F1Q5T1Q4 408 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 DENND5AQ6IQ26 1287 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 ARMC10Q8N2F6 343 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 TOP6BLQ8N6T0 577 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 WFDC12Q8WWY7 111 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 Q96M66 194 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 CEP41Q9BYV8 373 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 PRR13Q9NZ81 148 aa9.03□□□□□ -0.96
SEC22A-207ENST00000481965 DIS3Q9Y2L1 958 aaKnown RBP9.03□□□□□ -0.96
SEC22A-207ENST00000481965 LEFTY1O75610 366 aa9.02□□□□□ -0.97
SEC22A-207ENST00000481965 SCG5P05408 212 aa9.02□□□□□ -0.97
SEC22A-207ENST00000481965 POU3F2P20265 443 aaPredicted RBP9.02□□□□□ -0.97
SEC22A-207ENST00000481965 IREB2P48200 963 aaKnown RBP9.02□□□□□ -0.97
SEC22A-207ENST00000481965 GRB10Q13322 594 aa9.02□□□□□ -0.97
SEC22A-207ENST00000481965 PCBP1Q15365 356 aaKnown RBP eCLIP9.02□□□□□ -0.97
SEC22A-207ENST00000481965 CT47A1Q5JQC4 288 aaPredicted RBP9.02□□□□□ -0.97
SEC22A-207ENST00000481965 FAM214BQ7L5A3 538 aa9.02□□□□□ -0.97
SEC22A-207ENST00000481965 CRACR2BQ8N4Y2 399 aaPredicted RBP9.02□□□□□ -0.97
SEC22A-207ENST00000481965 MCMBPQ9BTE3 642 aa9.02□□□□□ -0.97
SEC22A-207ENST00000481965 MTFR1LQ9H019 292 aa9.02□□□□□ -0.97
SEC22A-207ENST00000481965 USP21Q9UK80 565 aa9.02□□□□□ -0.97
SEC22A-207ENST00000481965 GPR55Q9Y2T6 319 aaPredicted RBP9.02□□□□□ -0.97
SEC22A-207ENST00000481965 TNPO3Q9Y5L0 923 aaKnown RBP9.02□□□□□ -0.97
SEC22A-207ENST00000481965 ASXL2Q76L83 1435 aa9.02□□□□□ -0.97
SEC22A-207ENST00000481965 SPATA31C1P0DKV0 1188 aa9.01□□□□□ -0.97
SEC22A-207ENST00000481965 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
SEC22A-207ENST00000481965 HOXC12P31275 282 aa9.01□□□□□ -0.97
SEC22A-207ENST00000481965 EXOSC10Q01780 885 aaKnown RBP9.01□□□□□ -0.97
SEC22A-207ENST00000481965 FAM50AQ14320 339 aaKnown RBP9.01□□□□□ -0.97
SEC22A-207ENST00000481965 SEPT7Q16181 437 aaKnown RBP9.01□□□□□ -0.97
SEC22A-207ENST00000481965 ODR4Q5SWX8 454 aa9.01□□□□□ -0.97
SEC22A-207ENST00000481965 RAVER1Q8IY67 606 aaKnown RBP9.01□□□□□ -0.97
SEC22A-207ENST00000481965 ZDHHC15Q96MV8 337 aa9.01□□□□□ -0.97
SEC22A-207ENST00000481965 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
SEC22A-207ENST00000481965 NOP53Q9NZM5 478 aaKnown RBP9.01□□□□□ -0.97
SEC22A-207ENST00000481965 CNTNAP5Q8WYK1 1306 aa9.01□□□□□ -0.97
SEC22A-207ENST00000481965 H0Y8X5 98 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 SNRPB2P08579 225 aaKnown RBP9□□□□□ -0.97
SEC22A-207ENST00000481965 COL8A1P27658 744 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 MAP4P27816 1152 aaKnown RBP9□□□□□ -0.97
SEC22A-207ENST00000481965 PKN3Q6P5Z2 889 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
SEC22A-207ENST00000481965 DTWD2Q8NBA8 298 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 KREMEN2Q8NCW0 462 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 LEO1Q8WVC0 666 aaPredicted RBP9□□□□□ -0.97
SEC22A-207ENST00000481965 JDP2Q8WYK2 163 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 KCTD13Q8WZ19 329 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 PTPRN2Q92932 1015 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 MEGF10Q96KG7 1140 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 MYRFLQ96LU7 910 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 CYP26B1Q9NR63 512 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 MCM8Q9UJA3 840 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 TRAF6Q9Y4K3 522 aa9□□□□□ -0.97
SEC22A-207ENST00000481965 PIK3R2O00459 728 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 SIGLEC6O43699 453 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 RASGRP1O95267 797 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 PRAMEF1O95521 474 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 BMP3P12645 472 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 PMLP29590 882 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 CTSKP43235 329 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 LHFPL2Q6ZUX7 228 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 PPM1KQ8N3J5 372 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 ZNF775Q96BV0 537 aaPredicted RBP8.99□□□□□ -0.97
SEC22A-207ENST00000481965 YIPF2Q9BWQ6 316 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 TPX2Q9ULW0 747 aaKnown RBP8.99□□□□□ -0.97
SEC22A-207ENST00000481965 WASHC2CQ9Y4E1 1318 aa8.99□□□□□ -0.97
SEC22A-207ENST00000481965 TCRBV16S1A1N1A0A5B0 115 aa8.98□□□□□ -0.97
SEC22A-207ENST00000481965 SHISA3A0PJX4 238 aa8.98□□□□□ -0.97
SEC22A-207ENST00000481965 ARNTLO00327 626 aa8.98□□□□□ -0.97
SEC22A-207ENST00000481965 EFCAB14O75071 495 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms