RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 GUCA1BQ9UMX6 200 aa16.07■□□□□ 0.16
NR1H3-220ENST00000481020 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 UBE2Q2LH0YL09 131 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 PARP1P09874 1014 aaKnown RBP16.06■□□□□ 0.16
NR1H3-220ENST00000481020 APBA1Q02410 837 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 NNTQ13423 1086 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 ALS2CLQ60I27 953 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 ADSSL1Q8N142 457 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 TRIM58Q8NG06 486 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 JAKMIP2Q96AA8 810 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 CEP89Q96ST8 783 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 CUEDC2Q9H467 287 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 GREM2Q9H772 168 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 TAB2Q9NYJ8 693 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 MAGEC2Q9UBF1 373 aaPredicted RBP16.06■□□□□ 0.16
NR1H3-220ENST00000481020 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
NR1H3-220ENST00000481020 TTC26A0AVF1 554 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 GOLGA6BA6NDN3 693 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 EBAG9O00559 213 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 SRGNP10124 158 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 ATP2B1P20020 1258 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 IRX3P78415 501 aaPredicted RBP16.05■□□□□ 0.16
NR1H3-220ENST00000481020 ZBED6P86452 979 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 PPARAQ07869 468 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 MMS22LQ6ZRQ5 1243 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 KIAA1328Q86T90 577 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 AENQ8WTP8 325 aaKnown RBP16.05■□□□□ 0.16
NR1H3-220ENST00000481020 MMS19Q96T76 1030 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 SELENOOQ9BVL4 669 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 SHTN1A0MZ66 631 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 GOLGA6CA6NDK9 693 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 PSMA7O14818 248 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 FGRP09769 529 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 GOLGA6DP0CG33 693 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 CALML3P27482 149 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 HERVK_113P62684 666 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 PTGDRQ13258 359 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 GLE1Q53GS7 698 aaKnown RBP16.05■□□□□ 0.16
NR1H3-220ENST00000481020 EMBQ6PCB8 327 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 PACS2Q86VP3 889 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 DHTKD1Q96HY7 919 aaPredicted RBP16.05■□□□□ 0.16
NR1H3-220ENST00000481020 SH3GL2Q99962 352 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 ARMT1Q9H993 441 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 GOLGA6AQ9NYA3 693 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 RREB1Q92766 1687 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 TNKSO95271 1327 aa16.05■□□□□ 0.16
NR1H3-220ENST00000481020 MYH3P11055 1940 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 BICDL2A1A5D9 508 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 ZEB2O60315 1214 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 PHACTR2O75167 634 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 ATP1A1P05023 1023 aaKnown RBP16.04■□□□□ 0.16
NR1H3-220ENST00000481020 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 IQCA1Q86XH1 822 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 ZSCAN10Q96SZ4 725 aaPredicted RBP16.04■□□□□ 0.16
NR1H3-220ENST00000481020 CHP1Q99653 195 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 RNF14Q9UBS8 474 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 TACC3Q9Y6A5 838 aa16.04■□□□□ 0.16
NR1H3-220ENST00000481020 ANKRD36CQ5JPF3 1778 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 SRRM3A6NNA2 597 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 ERVV-1B6SEH8 477 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 LAD1O00515 517 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 USO1O60763 962 aaKnown RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 TCP1P17987 556 aaKnown RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 HNRNPH3P31942 346 aaKnown RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 VAV2P52735 878 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 SKOR1P84550 965 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 KIF5AQ12840 1032 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 COBLL1Q53SF7 1204 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 RRP12Q5JTH9 1297 aaKnown RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 FOXR1Q6PIV2 292 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 B4GALNT4Q76KP1 1039 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 RPAINQ86UA6 219 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 SMYD4Q8IYR2 804 aaPredicted RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 C1orf131Q8NDD1 294 aaKnown RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 CAGE1Q8TC20 777 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 CCDC47Q96A33 483 aaKnown RBP16.03■□□□□ 0.16
NR1H3-220ENST00000481020 TTYH3Q9C0H2 523 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 SH3GLB2Q9NR46 395 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 TOMM22Q9NS69 142 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
NR1H3-220ENST00000481020 RNF225M0QZC1 329 aaPredicted RBP16.02■□□□□ 0.16
NR1H3-220ENST00000481020 RHOBTB3O94955 611 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 ABL1P00519 1130 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 GGCXP38435 758 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 IRAK1P51617 712 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 EPHB4P54760 987 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 RASGRF1Q13972 1273 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 EMC10Q5UCC4 262 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 WDR59Q6PJI9 974 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 TMTC3Q6ZXV5 915 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 IRF2BP1Q8IU81 584 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 CAVIN3Q969G5 261 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 TACO1Q9BSH4 297 aaKnown RBP16.02■□□□□ 0.16
NR1H3-220ENST00000481020 EXOC1Q9NV70 894 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 TSKSQ9UJT2 592 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 SPATA31A3Q5VYP0 1347 aa16.02■□□□□ 0.16
NR1H3-220ENST00000481020 NUTM2BA6NNL0 878 aaPredicted RBP16.02■□□□□ 0.15
NR1H3-220ENST00000481020 NUTM2EB1AL46 878 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms