RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 RNF180Q86T96 592 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 TEX11Q8IYF3 940 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 CRACR2BQ8N4Y2 399 aaPredicted RBP13.71□□□□□ -0.21
LSM2-212ENST00000477182 SLC44A5Q8NCS7 719 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 TOX2Q96NM4 488 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.71□□□□□ -0.21
LSM2-212ENST00000477182 BACH2Q9BYV9 841 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 CRNKL1Q9BZJ0 848 aaKnown RBP13.71□□□□□ -0.21
LSM2-212ENST00000477182 ANO2Q9NQ90 1003 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 ZBTB21Q9ULJ3 1066 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 SLC4A4Q9Y6R1 1079 aa13.71□□□□□ -0.21
LSM2-212ENST00000477182 DCDC2CA8MYV0 355 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 REC8O95072 547 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 TIMP1P01033 207 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
LSM2-212ENST00000477182 PBX2P40425 430 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 USP14P54578 494 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 PTH1RQ03431 593 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 CATSPERGQ6ZRH7 1159 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 ANKRD33Q7Z3H0 272 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 ALYREFQ86V81 257 aaKnown RBP13.7□□□□□ -0.22
LSM2-212ENST00000477182 METTL16Q86W50 562 aaKnown RBP13.7□□□□□ -0.22
LSM2-212ENST00000477182 CERS3Q8IU89 383 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 SDR42E1Q8WUS8 393 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 FEZ1Q99689 392 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 LSG1Q9H089 658 aaKnown RBP13.7□□□□□ -0.22
LSM2-212ENST00000477182 EPHX3Q9H6B9 360 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 MUC6Q6W4X9 2439 aa13.7□□□□□ -0.22
LSM2-212ENST00000477182 XIRP2A4UGR9 3374 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 SIPA1L1O43166 1804 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 CHD9Q3L8U1 2897 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 FOXP2O15409 715 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 GPR37L1O60883 481 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 APPP05067 770 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 RARBP10826 455 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 GNAT2P19087 354 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 ADORA2AP29274 412 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 JAG1P78504 1218 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 MFSD5Q6N075 450 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 TGFBRAP1Q8WUH2 860 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 SNX27Q96L92 541 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 EPB41L4AQ9HCS5 686 aaPredicted RBP13.69□□□□□ -0.22
LSM2-212ENST00000477182 XPNPEP3Q9NQH7 507 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 BTBD7Q9P203 1132 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 NRBP1Q9UHY1 535 aa13.69□□□□□ -0.22
LSM2-212ENST00000477182 A0A1W2PQ45 241 aaPredicted RBP13.68□□□□□ -0.22
LSM2-212ENST00000477182 A0A1W2PQY0 241 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 GSG1L2A8MUP6 293 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 PATL2C9JE40 543 aaKnown RBP13.68□□□□□ -0.22
LSM2-212ENST00000477182 GDF11O95390 407 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 USP5P45974 858 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 FAAP100Q0VG06 881 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 TMEM240Q5SV17 173 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 RASIP1Q5U651 963 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 PSRC1Q6PGN9 363 aaPredicted RBP13.68□□□□□ -0.22
LSM2-212ENST00000477182 DSCC1Q9BVC3 393 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 MTIF3Q9H2K0 278 aaKnown RBP13.68□□□□□ -0.22
LSM2-212ENST00000477182 SLC28A3Q9HAS3 691 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 SMCHD1A6NHR9 2005 aa13.68□□□□□ -0.22
LSM2-212ENST00000477182 MYH8P13535 1937 aa13.67□□□□□ -0.22
LSM2-212ENST00000477182 GRXCR1A8MXD5 290 aa13.67□□□□□ -0.22
LSM2-212ENST00000477182 EIF5BO60841 1220 aaKnown RBP13.67□□□□□ -0.22
LSM2-212ENST00000477182 MAPKAPK5Q8IW41 473 aa13.67□□□□□ -0.22
LSM2-212ENST00000477182 IFNL3Q8IZI9 196 aa13.67□□□□□ -0.22
LSM2-212ENST00000477182 NUP133Q8WUM0 1156 aa13.67□□□□□ -0.22
LSM2-212ENST00000477182 HERVK_113Q902F9 699 aa13.67□□□□□ -0.22
LSM2-212ENST00000477182 MAP4K1Q92918 833 aa13.67□□□□□ -0.22
LSM2-212ENST00000477182 DNAJC18Q9H819 358 aa13.67□□□□□ -0.22
LSM2-212ENST00000477182 FLT1P17948 1338 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 MROH7Q68CQ1 1323 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 HLA-DOAP06340 250 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 VCAM1P19320 739 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 TDO2P48775 406 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 TFF2Q03403 129 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 ZYXQ15942 572 aaKnown RBP13.66□□□□□ -0.22
LSM2-212ENST00000477182 PRAMEF19Q5SWL8 479 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 ABRAQ8N0Z2 381 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 TMEM199Q8N511 208 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 TSEN34Q9BSV6 310 aaKnown RBP13.66□□□□□ -0.22
LSM2-212ENST00000477182 USP26Q9BXU7 913 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 NACAP1Q9BZK3 213 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 KIAA1683Q9H0B3 1180 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 NAPBQ9H115 298 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 DCP1AQ9NPI6 582 aaPredicted RBP13.66□□□□□ -0.22
LSM2-212ENST00000477182 ATP8A2Q9NTI2 1148 aa13.66□□□□□ -0.22
LSM2-212ENST00000477182 SAP30BPQ9UHR5 308 aaKnown RBP13.66□□□□□ -0.22
LSM2-212ENST00000477182 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
LSM2-212ENST00000477182 SPDYE16A6NNV3 312 aaPredicted RBP13.65□□□□□ -0.22
LSM2-212ENST00000477182 FGAP02671 866 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 KCNQ1P51787 676 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 SKIV2LQ15477 1246 aaKnown RBP13.65□□□□□ -0.22
LSM2-212ENST00000477182 ALX1Q15699 326 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 SHROOM1Q2M3G4 852 aaPredicted RBP13.65□□□□□ -0.22
LSM2-212ENST00000477182 GIMAP6Q6P9H5 292 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 C16orf59Q7L2K0 433 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 DDRGK1Q96HY6 314 aa13.65□□□□□ -0.22
LSM2-212ENST00000477182 MOV10L1Q9BXT6 1211 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms