RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PSMC4P43686 418 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 FCGRTP55899 365 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 ANAPC15P60006 121 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 WTAPQ15007 396 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 TMEM67Q5HYA8 995 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 KCTD1Q719H9 257 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 CHST3Q7LGC8 479 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 SPATC1LQ9H0A9 340 aa19.84■□□□□ 0.77
SCAF11-206ENST00000474828 ERICH2A1L162 156 aa19.83■□□□□ 0.77
SCAF11-206ENST00000474828 CCNA1P78396 465 aa19.83■□□□□ 0.77
SCAF11-206ENST00000474828 ASPRV1Q53RT3 343 aa19.83■□□□□ 0.77
SCAF11-206ENST00000474828 RIOX2Q8IUF8 465 aa19.83■□□□□ 0.77
SCAF11-206ENST00000474828 MOV10L1Q9BXT6 1211 aaKnown RBP19.83■□□□□ 0.77
SCAF11-206ENST00000474828 MCOLN1Q9GZU1 580 aa19.83■□□□□ 0.77
SCAF11-206ENST00000474828 PORCNQ9H237 461 aa19.83■□□□□ 0.77
SCAF11-206ENST00000474828 ZSWIM6Q9HCJ5 1215 aa19.83■□□□□ 0.77
SCAF11-206ENST00000474828 GJD2Q9UKL4 321 aa19.83■□□□□ 0.77
SCAF11-206ENST00000474828 MGAMO43451 1857 aa19.83■□□□□ 0.76
SCAF11-206ENST00000474828 ZSWIM8A7E2V4 1837 aa19.83■□□□□ 0.76
SCAF11-206ENST00000474828 PALM3A6NDB9 673 aaPredicted RBP19.82■□□□□ 0.76
SCAF11-206ENST00000474828 RAD21O60216 631 aa19.82■□□□□ 0.76
SCAF11-206ENST00000474828 USP6NLQ92738 828 aa19.82■□□□□ 0.76
SCAF11-206ENST00000474828 PAGR1Q9BTK6 254 aa19.82■□□□□ 0.76
SCAF11-206ENST00000474828 RANBP17Q9H2T7 1088 aaKnown RBP19.82■□□□□ 0.76
SCAF11-206ENST00000474828 GPHNQ9NQX3 736 aaPredicted RBP19.82■□□□□ 0.76
SCAF11-206ENST00000474828 SRRDQ9UH36 339 aa19.82■□□□□ 0.76
SCAF11-206ENST00000474828 PRR12Q9ULL5 1215 aa19.82■□□□□ 0.76
SCAF11-206ENST00000474828 PTPN22Q9Y2R2 807 aa19.82■□□□□ 0.76
SCAF11-206ENST00000474828 ZNF536O15090 1300 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 SLC25A27O95847 323 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 PSMA5P28066 241 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 IRF5Q13568 498 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 GRM4Q14833 912 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 TTBK2Q6IQ55 1244 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 FBXO46Q6PJ61 603 aaPredicted RBP19.81■□□□□ 0.76
SCAF11-206ENST00000474828 MROH8Q9H579 483 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 MAD2L2Q9UI95 211 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 TRIM17Q9Y577 477 aa19.81■□□□□ 0.76
SCAF11-206ENST00000474828 ZBED4O75132 1171 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 DDAH1O94760 285 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 RPS6KB1P23443 525 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 HOXD10P28358 340 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 COPB2P35606 906 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 STAT3P40763 770 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 RCAN1P53805 252 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 EVCP57679 992 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 MORN1Q5T089 497 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 ABRAQ8N0Z2 381 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 KIFC2Q96AC6 838 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 MTMR8Q96EF0 704 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 JAKMIP1Q96N16 626 aaKnown RBP19.8■□□□□ 0.76
SCAF11-206ENST00000474828 TEX13BQ9BXU2 312 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 COL11A1P12107 1806 aaPredicted RBP19.8■□□□□ 0.76
SCAF11-206ENST00000474828 ZNF236Q9UL36 1845 aa19.8■□□□□ 0.76
SCAF11-206ENST00000474828 PLXNB2O15031 1838 aa19.79■□□□□ 0.76
SCAF11-206ENST00000474828 TNPO2O14787 897 aaKnown RBP19.79■□□□□ 0.76
SCAF11-206ENST00000474828 STRNO43815 780 aa19.79■□□□□ 0.76
SCAF11-206ENST00000474828 FMNL1O95466 1100 aaPredicted RBP19.79■□□□□ 0.76
SCAF11-206ENST00000474828 IGHA2P01877 340 aa19.79■□□□□ 0.76
SCAF11-206ENST00000474828 PARP1P09874 1014 aaKnown RBP19.79■□□□□ 0.76
SCAF11-206ENST00000474828 CCDC96Q2M329 555 aa19.79■□□□□ 0.76
SCAF11-206ENST00000474828 SYDE2Q5VT97 1194 aa19.79■□□□□ 0.76
SCAF11-206ENST00000474828 BLOC1S2Q6QNY1 142 aa19.79■□□□□ 0.76
SCAF11-206ENST00000474828 GPR142Q7Z601 462 aa19.79■□□□□ 0.76
SCAF11-206ENST00000474828 ZNF654Q8IZM8 581 aa19.79■□□□□ 0.76
SCAF11-206ENST00000474828 HOXC6P09630 235 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 PTPREP23469 700 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 SMARCA1P28370 1054 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 GRB14Q14449 540 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 RUFY3Q7L099 469 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 PLEKHH3Q7Z736 793 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 CATIPQ7Z7H3 387 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 COA7Q96BR5 231 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 ALDH8A1Q9H2A2 487 aaPredicted RBP19.78■□□□□ 0.76
SCAF11-206ENST00000474828 GPCPD1Q9NPB8 672 aa19.78■□□□□ 0.76
SCAF11-206ENST00000474828 FRMPD2Q68DX3 1309 aaPredicted RBP19.77■□□□□ 0.76
SCAF11-206ENST00000474828 XRCC5P13010 732 aaKnown RBP19.77■□□□□ 0.76
SCAF11-206ENST00000474828 ERCC3P19447 782 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 SLC16A2P36021 539 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 PRKCZQ05513 592 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 SLC35G1Q2M3R5 365 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 STAG2Q8N3U4 1231 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 SOCS4Q8WXH5 440 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 RIOX1Q9H6W3 641 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 PNMA2Q9UL42 364 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 RIPK3Q9Y572 518 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 NID2Q14112 1375 aa19.77■□□□□ 0.76
SCAF11-206ENST00000474828 SLC15A5A6NIM6 579 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 ICAM1P05362 532 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 GOLGA8HP0CJ92 632 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 CALM1P0DP23 149 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 CALM2P0DP24 149 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 CALM3P0DP25 149 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 FLT3LGP49771 235 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 MLLT1Q03111 559 aaPredicted RBP19.76■□□□□ 0.75
SCAF11-206ENST00000474828 TKFCQ3LXA3 575 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 APOA5Q6Q788 366 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 PXYLP1Q8TE99 480 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 LRRC2Q9BYS8 371 aa19.76■□□□□ 0.75
SCAF11-206ENST00000474828 GABRQQ9UN88 632 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms