RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 PDE6AP16499 860 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 USP8P40818 1118 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 DMP1Q13316 513 aaPredicted RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 BIRC3Q13489 604 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 KIAA0753Q2KHM9 967 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 FOXD4L6Q3SYB3 417 aaPredicted RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 BEND3Q5T5X7 828 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 CFAP58Q5T655 872 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 SYDE2Q5VT97 1194 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 FOXD4L3Q6VB84 417 aaPredicted RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 RUFY4Q6ZNE9 571 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 USP50Q70EL3 339 aaPredicted RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 HOMEZQ8IX15 550 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 GSDMBQ8TAX9 411 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 PHACTR3Q96KR7 559 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 SLF1Q9BQI6 1058 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 TMEM206Q9H813 350 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 CACYBPQ9HB71 228 aaKnown RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 TBC1D22BQ9NU19 505 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 PPME1Q9Y570 386 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 ITSN1Q15811 1721 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 PFASO15067 1338 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 ABCC4O15439 1325 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 EIF3CLB5ME19 914 aaKnown RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 M0R2C6 588 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 MSCO60682 206 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 CYP2E1P05181 493 aaPredicted RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 ZSCAN22P10073 491 aaPredicted RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 STXBP2Q15833 593 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 ADALQ6DHV7 355 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 KIAA1841Q6NSI8 718 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 CPXCR1Q8N123 301 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 PGBD4Q96DM1 585 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 EIF3CQ99613 913 aaKnown RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 TTC1Q99614 292 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 DDX50Q9BQ39 737 aaKnown RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 HTATIP2Q9BUP3 242 aa5.14□□□□□ -1.59
CCNL1-215ENST00000474539 TOPORSQ9NS56 1045 aaPredicted RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 ZC3H4Q9UPT8 1303 aaKnown RBP5.14□□□□□ -1.59
CCNL1-215ENST00000474539 PSDA5PKW4 1024 aaPredicted RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 H7C1W4 665 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 TNPO2O14787 897 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 CYP19A1P11511 503 aaPredicted RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 RPS6KB1P23443 525 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 CRKP46108 304 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 CCT2P78371 535 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 GSE1Q14687 1217 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 PLCB4Q15147 1175 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 DOK7Q18PE1 504 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 CCDC84Q86UT8 332 aaPredicted RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 THEM5Q8N1Q8 247 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 PSMD1Q99460 953 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 FEZ2Q9UHY8 353 aaPredicted RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 RIOK3O14730 519 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 WDR46O15213 610 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 NKRFO15226 690 aaKnown RBP eCLIP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 TRAK2O60296 914 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 HSPD1P10809 573 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 ANXA13P27216 316 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 ALDH3A1P30838 453 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 KRT76Q01546 638 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 R3HDM1Q15032 1099 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 TTC38Q5R3I4 469 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 TBC1D9Q6ZT07 1266 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 ARMCX2Q7L311 632 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 ARHGEF1Q92888 912 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 RNF34Q969K3 372 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 BACH2Q9BYV9 841 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 SERPINA10Q9UK55 444 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 PRR36Q9H6K5 1346 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 ZMYM2Q9UBW7 1377 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 N4BP3O15049 544 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 C21orf2O43822 256 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 AKR1B10O60218 316 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 TACC1O75410 805 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 SUPT20HL2P0C7V6 817 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 STAG3L1P0CL83 205 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 AP3M2P53677 418 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 POLGP54098 1239 aaPredicted RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 TCP10Q12799 353 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 TAF1CQ15572 869 aaPredicted RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 IFNL3Q8IZI9 196 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 CHST13Q8NET6 341 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 NSUN6Q8TEA1 469 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 ZNF592Q92610 1267 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 DDX17Q92841 729 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 DBNDD2Q9BQY9 259 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 PFDN4Q9NQP4 134 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 ARHGAP23Q9P227 1491 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 RGS2P41220 211 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 LIG4P49917 911 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 GPSM2P81274 684 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 SARNPP82979 210 aaKnown RBP5.13□□□□□ -1.59
CCNL1-215ENST00000474539 LETM2Q2VYF4 491 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 NEK8Q86SG6 692 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 PLA2G4DQ86XP0 818 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 PLCD3Q8N3E9 789 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 PNMA1Q8ND90 353 aa5.13□□□□□ -1.59
CCNL1-215ENST00000474539 MCPH1Q8NEM0 835 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms