RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
ACTB-209ENST00000473257 COL25A1Q9BXS0 654 aaPredicted RBP13.44□□□□□ -0.26
ACTB-209ENST00000473257 TTYH1Q9H313 450 aaPredicted RBP13.44□□□□□ -0.26
ACTB-209ENST00000473257 RAVER2Q9HCJ3 691 aaKnown RBP13.44□□□□□ -0.26
ACTB-209ENST00000473257 CLIP2Q9UDT6 1046 aa13.44□□□□□ -0.26
ACTB-209ENST00000473257 CHD9Q3L8U1 2897 aa13.44□□□□□ -0.26
ACTB-209ENST00000473257 F5H6K3 240 aa13.43□□□□□ -0.26
ACTB-209ENST00000473257 SNAI1O95863 264 aaPredicted RBP13.43□□□□□ -0.26
ACTB-209ENST00000473257 KLRC3Q07444 240 aa13.43□□□□□ -0.26
ACTB-209ENST00000473257 ZNF697Q5TEC3 545 aa13.43□□□□□ -0.26
ACTB-209ENST00000473257 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.43□□□□□ -0.267e-13■■■■□ 19.9
ACTB-209ENST00000473257 OTUD7AQ8TE49 926 aaPredicted RBP13.43□□□□□ -0.26
ACTB-209ENST00000473257 KIFC2Q96AC6 838 aa13.43□□□□□ -0.26
ACTB-209ENST00000473257 SEC62Q99442 399 aaKnown RBP13.43□□□□□ -0.26
ACTB-209ENST00000473257 SLF1Q9BQI6 1058 aa13.43□□□□□ -0.26
ACTB-209ENST00000473257 SEMA6BQ9H3T3 888 aa13.43□□□□□ -0.26
ACTB-209ENST00000473257 MKNK2Q9HBH9 465 aa13.43□□□□□ -0.26
ACTB-209ENST00000473257 ECHDC1Q9NTX5 307 aa13.43□□□□□ -0.26
ACTB-209ENST00000473257 ZHX1Q9UKY1 873 aaPredicted RBP13.43□□□□□ -0.26
ACTB-209ENST00000473257 GREB1LQ9C091 1923 aaPredicted RBP13.43□□□□□ -0.26
ACTB-209ENST00000473257 SYNRGQ9UMZ2 1314 aa13.42□□□□□ -0.26
ACTB-209ENST00000473257 ADAMTS4O75173 837 aa13.42□□□□□ -0.26
ACTB-209ENST00000473257 SNAP25P60880 206 aa13.42□□□□□ -0.26
ACTB-209ENST00000473257 FAM109BQ6ICB4 259 aaPredicted RBP13.42□□□□□ -0.26
ACTB-209ENST00000473257 ZSCAN25Q6NSZ9 544 aa13.42□□□□□ -0.26
ACTB-209ENST00000473257 RASGRP2Q7LDG7 609 aa13.42□□□□□ -0.26
ACTB-209ENST00000473257 FGD4Q96M96 766 aa13.42□□□□□ -0.26
ACTB-209ENST00000473257 HOMER2Q9NSB8 354 aa13.42□□□□□ -0.26
ACTB-209ENST00000473257 ARPP21Q9UBL0 812 aaPredicted RBP13.42□□□□□ -0.26
ACTB-209ENST00000473257 MCM3APO60318 1980 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 IGKV6D-41A0A0C4DH26 115 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 RNF113AO15541 343 aaKnown RBP13.41□□□□□ -0.26
ACTB-209ENST00000473257 GPAA1O43292 621 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 APPP05067 770 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 CLTBP09497 229 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 TDO2P48775 406 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 ACLYP53396 1101 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 SBK1Q52WX2 424 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 RNF180Q86T96 592 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 KBTBD3Q8NAB2 608 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 CEP95Q96GE4 821 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 TEX13BQ9BXU2 312 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 ISY1Q9ULR0 285 aaKnown RBP13.41□□□□□ -0.26
ACTB-209ENST00000473257 CNPY2Q9Y2B0 182 aa13.41□□□□□ -0.26
ACTB-209ENST00000473257 DNAJC25-GNG10A0A024R161 153 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 AKR1A1P14550 325 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 RAG1P15918 1043 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 CNTN2Q02246 1040 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 FAAP100Q0VG06 881 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 KCNA10Q16322 511 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 MAFAQ8NHW3 353 aaPredicted RBP13.4□□□□□ -0.26
ACTB-209ENST00000473257 APPBP2Q92624 585 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 RNPC3Q96LT9 517 aaKnown RBP13.4□□□□□ -0.26
ACTB-209ENST00000473257 TMEM39AQ9NV64 488 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 NYAP2Q9P242 653 aa13.4□□□□□ -0.26
ACTB-209ENST00000473257 KIAA0355O15063 1070 aa13.39□□□□□ -0.27
ACTB-209ENST00000473257 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
ACTB-209ENST00000473257 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
ACTB-209ENST00000473257 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
ACTB-209ENST00000473257 NRBP1Q9UHY1 535 aa13.39□□□□□ -0.27
ACTB-209ENST00000473257 DIS3Q9Y2L1 958 aaKnown RBP13.39□□□□□ -0.27
ACTB-209ENST00000473257 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
ACTB-209ENST00000473257 ROBO3Q96MS0 1386 aa13.39□□□□□ -0.27
ACTB-209ENST00000473257 MYH4Q9Y623 1939 aa13.39□□□□□ -0.27
ACTB-209ENST00000473257 CHD7Q9P2D1 2997 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 GRXCR1A8MXD5 290 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 ZBED4O75132 1171 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 C6orf222P0C671 652 aaPredicted RBP13.38□□□□□ -0.27
ACTB-209ENST00000473257 BEX3Q00994 111 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 ACVR2BQ13705 512 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 CCDC144BQ3MJ40 725 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 IFNL3Q8IZI9 196 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 ZNF444Q8N0Y2 327 aaPredicted RBP13.38□□□□□ -0.27
ACTB-209ENST00000473257 ANKRD35Q8N283 1001 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 PRPF38AQ8NAV1 312 aaKnown RBP13.38□□□□□ -0.27
ACTB-209ENST00000473257 KLHDC9Q8NEP7 349 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 AGBL1Q96MI9 1066 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 DCTPP1Q9H773 170 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 SLC38A10Q9HBR0 1119 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 STARD7Q9NQZ5 370 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 MTMR4Q9NYA4 1195 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 FAM184BQ9ULE4 1060 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
ACTB-209ENST00000473257 CTDP1Q9Y5B0 961 aaPredicted RBP13.38□□□□□ -0.27
ACTB-209ENST00000473257 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.37□□□□□ -0.27
ACTB-209ENST00000473257 NMT2O60551 498 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 SMAD3P84022 425 aaKnown RBP13.37□□□□□ -0.27
ACTB-209ENST00000473257 FPGSQ05932 587 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 GRIN2CQ14957 1233 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 TMEM63BQ5T3F8 832 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 SLFN13Q68D06 897 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 C16orf59Q7L2K0 433 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 USP38Q8NB14 1042 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 VTI1AQ96AJ9 217 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 PURBQ96QR8 312 aaKnown RBP13.37□□□□□ -0.27
ACTB-209ENST00000473257 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
ACTB-209ENST00000473257 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms