RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 LCORLQ8N3X6 602 aa22.89■■□□□ 1.25
NCKIPSD-209ENST00000470006 KLHDC9Q8NEP7 349 aa22.89■■□□□ 1.25
NCKIPSD-209ENST00000470006 TSPYL2Q9H2G4 693 aaPredicted RBP22.89■■□□□ 1.25
NCKIPSD-209ENST00000470006 GOPCQ9HD26 462 aa22.89■■□□□ 1.25
NCKIPSD-209ENST00000470006 BDP1A6H8Y1 2624 aa22.89■■□□□ 1.25
NCKIPSD-209ENST00000470006 TLR3O15455 904 aaKnown RBP22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 EEF2P13639 858 aaKnown RBP22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 RAB30Q15771 203 aa22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 ZKSCAN2Q63HK3 967 aa22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 AMOTL1Q8IY63 956 aa22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 PCSK9Q8NBP7 692 aaKnown RBP22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 CCDC17Q96LX7 622 aa22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 BCL11AQ9H165 835 aa22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 ARMT1Q9H993 441 aa22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 PPP1R9AQ9ULJ8 1098 aa22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 ADAMTS5Q9UNA0 930 aa22.88■■□□□ 1.25
NCKIPSD-209ENST00000470006 ELP1O95163 1332 aa22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 MYADML2A6NDP7 307 aa22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 DUSP11O75319 330 aaKnown RBP22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 ASGR1P07306 291 aa22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 ADGRE1Q14246 886 aa22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 FAM83BQ5T0W9 1011 aa22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 MICALL1Q8N3F8 863 aa22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 MSL3Q8N5Y2 521 aaKnown RBP22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 DNAJC2Q99543 621 aaKnown RBP22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 MTIF3Q9H2K0 278 aaKnown RBP22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 NKX2-4Q9H2Z4 354 aa22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 SLC28A3Q9HAS3 691 aa22.87■■□□□ 1.25
NCKIPSD-209ENST00000470006 A0A0U1RQG5 324 aaPredicted RBP22.86■■□□□ 1.25
NCKIPSD-209ENST00000470006 SNAI1O95863 264 aaPredicted RBP22.86■■□□□ 1.25
NCKIPSD-209ENST00000470006 CDK8P49336 464 aa22.86■■□□□ 1.25
NCKIPSD-209ENST00000470006 ZNF214Q9UL59 606 aaPredicted RBP22.86■■□□□ 1.25
NCKIPSD-209ENST00000470006 EXOC6BQ9Y2D4 811 aa22.86■■□□□ 1.25
NCKIPSD-209ENST00000470006 CTDP1Q9Y5B0 961 aaPredicted RBP22.86■■□□□ 1.25
NCKIPSD-209ENST00000470006 TCF20Q9UGU0 1960 aaKnown RBP22.86■■□□□ 1.25
NCKIPSD-209ENST00000470006 SYNGAP1Q96PV0 1343 aa22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 BAZ2AQ9UIF9 1905 aaKnown RBP22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 ARVCFO00192 962 aa22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 GOLIM4O00461 696 aa22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 CDK7P50613 346 aa22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 IRX5P78411 483 aaPredicted RBP22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 GNASQ5JWF2 1037 aa22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 RASIP1Q5U651 963 aa22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 SNRNP48Q6IEG0 339 aaKnown RBP22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 CCSAPQ6IQ19 270 aaPredicted RBP22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 ERC1Q8IUD2 1116 aa22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 FTSJ3Q8IY81 847 aaKnown RBP22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 KANSL2Q9H9L4 492 aa22.85■■□□□ 1.25
NCKIPSD-209ENST00000470006 CHD9Q3L8U1 2897 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 CYP2D7A0A087X1C5 515 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 PRKAB2O43741 272 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 ACVR2BQ13705 512 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 ITPRIPQ8IWB1 547 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 DDRGK1Q96HY6 314 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 TEX13BQ9BXU2 312 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 IL1RAPL2Q9NP60 686 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 IL23AQ9NPF7 189 aa22.84■■□□□ 1.25
NCKIPSD-209ENST00000470006 FGBP02675 491 aa22.83■■□□□ 1.25
NCKIPSD-209ENST00000470006 CYP2C18P33260 490 aa22.83■■□□□ 1.25
NCKIPSD-209ENST00000470006 NECAB3Q96P71 396 aaPredicted RBP22.83■■□□□ 1.25
NCKIPSD-209ENST00000470006 SLF1Q9BQI6 1058 aa22.83■■□□□ 1.25
NCKIPSD-209ENST00000470006 ATP8A2Q9NTI2 1148 aa22.83■■□□□ 1.25
NCKIPSD-209ENST00000470006 MBD4O95243 580 aa22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 CST5P28325 142 aaPredicted RBP22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 SKIV2LQ15477 1246 aaKnown RBP22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 CCDC144BQ3MJ40 725 aa22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 CPXCR1Q8N123 301 aa22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 REPS2Q8NFH8 660 aa22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 HERVK_113Q902F9 699 aa22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 CXXC1Q9P0U4 656 aaPredicted RBP22.82■■□□□ 1.24
NCKIPSD-209ENST00000470006 GBF1Q92538 1859 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 TCRBV5S4A2TA0A5A2 114 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 USP17L12C9JPN9 530 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 USP17L21D6R901 530 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 C12orf60Q5U649 245 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 MAMDC4Q6UXC1 1216 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 NOL8Q76FK4 1167 aaKnown RBP22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 OTOP2Q7RTS6 562 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 FAM126BQ8IXS8 530 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 ANKRD35Q8N283 1001 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 NUP88Q99567 741 aaPredicted RBP22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 C1QTNF1Q9BXJ1 281 aa22.81■■□□□ 1.24
NCKIPSD-209ENST00000470006 MCM3APO60318 1980 aa22.8■■□□□ 1.24
NCKIPSD-209ENST00000470006 SMIM22K7EJ46 135 aa22.8■■□□□ 1.24
NCKIPSD-209ENST00000470006 C16orf86Q6ZW13 317 aa22.8■■□□□ 1.24
NCKIPSD-209ENST00000470006 ABHD16BQ9H3Z7 469 aa22.8■■□□□ 1.24
NCKIPSD-209ENST00000470006 YBX2Q9Y2T7 364 aaKnown RBP22.8■■□□□ 1.24
NCKIPSD-209ENST00000470006 RIPK3Q9Y572 518 aa22.8■■□□□ 1.24
NCKIPSD-209ENST00000470006 ZBED4O75132 1171 aa22.79■■□□□ 1.24
NCKIPSD-209ENST00000470006 GJA9P57773 515 aa22.79■■□□□ 1.24
NCKIPSD-209ENST00000470006 PPP2R2DQ66LE6 453 aa22.79■■□□□ 1.24
NCKIPSD-209ENST00000470006 HIPK3Q9H422 1215 aa22.79■■□□□ 1.24
NCKIPSD-209ENST00000470006 DNAJC25-GNG10A0A024R161 153 aa22.78■■□□□ 1.24
NCKIPSD-209ENST00000470006 ADCY6O43306 1168 aa22.78■■□□□ 1.24
NCKIPSD-209ENST00000470006 IFIT2P09913 472 aaKnown RBP22.78■■□□□ 1.24
NCKIPSD-209ENST00000470006 RABGGTBP53611 331 aa22.78■■□□□ 1.24
NCKIPSD-209ENST00000470006 BEX3Q00994 111 aa22.78■■□□□ 1.24
NCKIPSD-209ENST00000470006 AAK1Q2M2I8 961 aa22.78■■□□□ 1.24
NCKIPSD-209ENST00000470006 SLFNL1Q499Z3 407 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms