RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 RRAGDQ9NQL2 400 aaPredicted RBP15.36■□□□□ 0.05
BRAT1-203ENST00000467558 COL3A1P02461 1466 aaPredicted RBP15.36■□□□□ 0.05
BRAT1-203ENST00000467558 ZNF827Q17R98 1081 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 NELFCDQ8IXH7 590 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 CUEDC2Q9H467 287 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 TBC1D7Q9P0N9 293 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 CDK8P49336 464 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 TPH2Q8IWU9 490 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 AK8Q96MA6 479 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 KIF2CQ99661 725 aa15.36■□□□□ 0.05
BRAT1-203ENST00000467558 USP17L3A6NCW0 530 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 USP17L4A6NCW7 530 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 GCNT3O95395 438 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 MYZAPP0CAP1 466 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 USP17L1Q7RTZ2 530 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 NLRX1Q86UT6 975 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 MB21D2Q8IYB1 491 aaPredicted RBP15.35■□□□□ 0.05
BRAT1-203ENST00000467558 DYDC1Q8WWB3 177 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 FAM212AQ96EL1 285 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 AIFM3Q96NN9 605 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 ALAS1P13196 640 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 RCAN1P53805 252 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 SLC9C1Q4G0N8 1177 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 SPATA1Q5VX52 437 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 MYOCDQ8IZQ8 938 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 FANCLQ9NW38 375 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 CSADQ9Y600 493 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 CLRN2A0PK11 232 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 BARGINQ6ZT62 677 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 GPBP1Q86WP2 473 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 MCF2L2Q86YR7 1114 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 TDRD7Q8NHU6 1098 aaKnown RBP15.35■□□□□ 0.05
BRAT1-203ENST00000467558 CCDC51Q96ER9 411 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 GPR101Q96P66 508 aaPredicted RBP15.35■□□□□ 0.05
BRAT1-203ENST00000467558 IVNS1ABPQ9Y6Y0 642 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 ACTN2P35609 894 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 IRX3P78415 501 aaPredicted RBP15.35■□□□□ 0.05
BRAT1-203ENST00000467558 NFIXQ14938 502 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 SF3B3Q15393 1217 aaKnown RBP15.35■□□□□ 0.05
BRAT1-203ENST00000467558 FOXP4Q8IVH2 680 aaPredicted RBP15.35■□□□□ 0.05
BRAT1-203ENST00000467558 FAM84BQ96KN1 310 aaPredicted RBP15.35■□□□□ 0.05
BRAT1-203ENST00000467558 KCNG1Q9UIX4 513 aa15.35■□□□□ 0.05
BRAT1-203ENST00000467558 SPATA31A6Q5VVP1 1343 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 SHTN1A0MZ66 631 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 EXOC3O60645 756 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 GNA14O95837 355 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 TUBB2AQ13885 445 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 TUBB2BQ9BVA1 445 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 NOP56O00567 594 aaKnown RBP15.34■□□□□ 0.05
BRAT1-203ENST00000467558 CAMTA2O94983 1202 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 RPN1P04843 607 aaKnown RBP15.34■□□□□ 0.05
BRAT1-203ENST00000467558 BIRC3Q13489 604 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 DCP1AQ9NPI6 582 aaPredicted RBP15.34■□□□□ 0.05
BRAT1-203ENST00000467558 REREQ9P2R6 1566 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 GCFC2P16383 781 aaKnown RBP15.34■□□□□ 0.05
BRAT1-203ENST00000467558 MORC3Q14149 939 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 USP17L2Q6R6M4 530 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 PODNQ7Z5L7 613 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 KRT222Q8N1A0 295 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 RASGRP4Q8TDF6 673 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 ERO1AQ96HE7 468 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 CAPZA3Q96KX2 299 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 CEP83Q9Y592 693 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 RICTORQ6R327 1708 aa15.34■□□□□ 0.05
BRAT1-203ENST00000467558 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.05
BRAT1-203ENST00000467558 SLFN14P0C7P3 912 aa15.33■□□□□ 0.05
BRAT1-203ENST00000467558 ERCC5P28715 1186 aaPredicted RBP15.33■□□□□ 0.05
BRAT1-203ENST00000467558 WDR44Q5JSH3 913 aa15.33■□□□□ 0.05
BRAT1-203ENST00000467558 MAEAQ7L5Y9 396 aa15.33■□□□□ 0.05
BRAT1-203ENST00000467558 RTKN2Q8IZC4 609 aa15.33■□□□□ 0.05
BRAT1-203ENST00000467558 TTLL6Q8N841 843 aa15.33■□□□□ 0.05
BRAT1-203ENST00000467558 NUCKS1Q9H1E3 243 aaKnown RBP15.33■□□□□ 0.05
BRAT1-203ENST00000467558 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.05
BRAT1-203ENST00000467558 KCNJ18B7U540 433 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 STRN3Q13033 797 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 KCNJ12Q14500 433 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 GNPTABQ3T906 1256 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 MIER3Q7Z3K6 550 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 KRT26Q7Z3Y9 468 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 MAATS1Q7Z4T9 603 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 PIGSQ96S52 555 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 RFX5P48382 616 aaPredicted RBP15.33■□□□□ 0.04
BRAT1-203ENST00000467558 ZRSR2Q15696 482 aaKnown RBP15.33■□□□□ 0.04
BRAT1-203ENST00000467558 TXNRD1Q16881 649 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 C17orf53Q8N3J3 647 aaPredicted RBP15.33■□□□□ 0.04
BRAT1-203ENST00000467558 SH3RF3Q8TEJ3 882 aaPredicted RBP15.33■□□□□ 0.04
BRAT1-203ENST00000467558 IWS1Q96ST2 819 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 NAPGQ99747 312 aaPredicted RBP15.33■□□□□ 0.04
BRAT1-203ENST00000467558 SRPRBQ9Y5M8 271 aaKnown RBP15.33■□□□□ 0.04
BRAT1-203ENST00000467558 NEDD4P46934 1319 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 PNPLA7Q6ZV29 1317 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 MAP2P11137 1827 aaKnown RBP15.33■□□□□ 0.04
BRAT1-203ENST00000467558 GOLGA6L7A0A1B0GV03 622 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 DNM2P50570 870 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 MCM6Q14566 821 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 TMTC3Q6ZXV5 915 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 CYB5R4Q7L1T6 521 aa15.33■□□□□ 0.04
BRAT1-203ENST00000467558 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 RAD17O75943 681 aa15.32■□□□□ 0.04
BRAT1-203ENST00000467558 KCTD1Q719H9 257 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms