RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 SVOPQ8N4V2 548 aa8.61□□□□□ -1.03
SND1-205ENST00000467238 EAF2Q96CJ1 260 aaPredicted RBP8.61□□□□□ -1.03
SND1-205ENST00000467238 NOL10Q9BSC4 688 aaKnown RBP8.61□□□□□ -1.03
SND1-205ENST00000467238 CCDC8Q9H0W5 538 aaPredicted RBP8.61□□□□□ -1.03
SND1-205ENST00000467238 TLR7Q9NYK1 1049 aaKnown RBP8.61□□□□□ -1.03
SND1-205ENST00000467238 PI4KBQ9UBF8 816 aa8.61□□□□□ -1.03
SND1-205ENST00000467238 HERC5Q9UII4 1024 aaKnown RBP8.61□□□□□ -1.03
SND1-205ENST00000467238 AGTPBP1Q9UPW5 1226 aa8.61□□□□□ -1.03
SND1-205ENST00000467238 MYO9BQ13459 2157 aa8.61□□□□□ -1.03
SND1-205ENST00000467238 LAMA2P24043 3122 aaKnown RBP8.6□□□□□ -1.03
SND1-205ENST00000467238 FLT1P17948 1338 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 SMCHD1A6NHR9 2005 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 NDUFV2P19404 249 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 GRK4P32298 578 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 PRKCZQ05513 592 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 MTFR1Q15390 333 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 TREML2Q5T2D2 321 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 METTL16Q86W50 562 aaKnown RBP8.6□□□□□ -1.03
SND1-205ENST00000467238 PROCA1Q8NCQ7 364 aaPredicted RBP8.6□□□□□ -1.03
SND1-205ENST00000467238 ZNF280CQ8ND82 737 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 RAET1EQ8TD07 263 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 PANK1Q8TE04 598 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 SMCR8Q8TEV9 937 aaPredicted RBP8.6□□□□□ -1.03
SND1-205ENST00000467238 TGFBRAP1Q8WUH2 860 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 KRTAP9-2Q9BYQ4 174 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 DHX36Q9H2U1 1008 aaKnown RBP8.6□□□□□ -1.03
SND1-205ENST00000467238 DNAJC18Q9H819 358 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 PIH1D3Q9NQM4 214 aaKnown RBP8.6□□□□□ -1.03
SND1-205ENST00000467238 EVA1BQ9NVM1 165 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 EXOC6BQ9Y2D4 811 aa8.6□□□□□ -1.03
SND1-205ENST00000467238 PARP14Q460N5 1801 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 FRMPD3Q5JV73 1810 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 RLFQ13129 1914 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 USP17L5A8MUK1 530 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 ADAM23O75077 832 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 NR3C2P08235 984 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 HMGCS2P54868 508 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 FOXK2Q01167 660 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 SPP2Q13103 211 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
SND1-205ENST00000467238 FAM110CQ1W6H9 321 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 ERC1Q8IUD2 1116 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 MAPKAPK5Q8IW41 473 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 SHISA4Q96DD7 197 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 GABRQQ9UN88 632 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 NDUFB9Q9Y6M9 179 aa8.59□□□□□ -1.03
SND1-205ENST00000467238 IDH1O75874 414 aaKnown RBP8.58□□□□□ -1.04
SND1-205ENST00000467238 ASNSP08243 561 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 CYP7A1P22680 504 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 FLT3LGP49771 235 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 DYNLL1P63167 89 aaKnown RBP8.58□□□□□ -1.04
SND1-205ENST00000467238 IRF5Q13568 498 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 AACSQ86V21 672 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 FOXP4Q8IVH2 680 aaPredicted RBP8.58□□□□□ -1.04
SND1-205ENST00000467238 ANKRD13CQ8N6S4 541 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 MAGEB6Q8N7X4 407 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 GCC1Q96CN9 775 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 PCMTD1Q96MG8 357 aaPredicted RBP8.58□□□□□ -1.04
SND1-205ENST00000467238 WDR18Q9BV38 432 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 AS3MTQ9HBK9 375 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 PALD1Q9ULE6 856 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 A0A0C4DFX4 3053 aa8.58□□□□□ -1.04
SND1-205ENST00000467238 COL6A3P12111 3177 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 COL11A1P12107 1806 aaPredicted RBP8.57□□□□□ -1.04
SND1-205ENST00000467238 TNPO2O14787 897 aaKnown RBP8.57□□□□□ -1.04
SND1-205ENST00000467238 ADCY3O60266 1144 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 HLA-DOAP06340 250 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 GJB1P08034 283 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 BMP2P12643 396 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 CCL5P13501 91 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 GJA8P48165 433 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 GCLCP48506 637 aaPredicted RBP8.57□□□□□ -1.04
SND1-205ENST00000467238 BACE1P56817 501 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 UBXN2AP68543 259 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 JAG1P78504 1218 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 KCNH2Q12809 1159 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 PABPC4Q13310 644 aaKnown RBP eCLIP8.57□□□□□ -1.04
SND1-205ENST00000467238 MTMR2Q13614 643 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 SHROOM1Q2M3G4 852 aaPredicted RBP8.57□□□□□ -1.04
SND1-205ENST00000467238 HSP90AB4PQ58FF6 505 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 TMED8Q6PL24 325 aaPredicted RBP8.57□□□□□ -1.04
SND1-205ENST00000467238 CERS3Q8IU89 383 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 LINC00528Q8N1L1 170 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 CRACR2BQ8N4Y2 399 aaPredicted RBP8.57□□□□□ -1.04
SND1-205ENST00000467238 MIGA1Q8NAN2 632 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 CDK15Q96Q40 435 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 ASCC2Q9H1I8 757 aaPredicted RBP8.57□□□□□ -1.04
SND1-205ENST00000467238 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 GINM1Q9NU53 330 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 SAP30BPQ9UHR5 308 aaKnown RBP8.57□□□□□ -1.04
SND1-205ENST00000467238 ZBTB21Q9ULJ3 1066 aa8.57□□□□□ -1.04
SND1-205ENST00000467238 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 ELNP15502 786 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 HOXA7P31268 230 aaPredicted RBP8.56□□□□□ -1.04
SND1-205ENST00000467238 MAP3K12Q12852 859 aa8.56□□□□□ -1.04
SND1-205ENST00000467238 UBE2Q1Q7Z7E8 422 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms