RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 PSMD1Q99460 953 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 CEBPZQ03701 1054 aaKnown RBP10.56□□□□□ -0.72
SCAF11-205ENST00000465950 NECAB2Q7Z6G3 386 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 TMEM199Q8N511 208 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 SPAG5Q96R06 1193 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 MEIS3Q99687 375 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 GREM2Q9H772 168 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 USP25Q9UHP3 1055 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 ADCY9O60503 1353 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 ADALQ6DHV7 355 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 COPRSQ9NQ92 184 aa10.56□□□□□ -0.72
SCAF11-205ENST00000465950 CFAP65Q6ZU64 1925 aaKnown RBP10.55□□□□□ -0.72
SCAF11-205ENST00000465950 NDC80O14777 642 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 LIN9Q5TKA1 542 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 SEPT14Q6ZU15 432 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 SLITRK6Q9H5Y7 841 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 LARSQ9P2J5 1176 aaKnown RBP10.55□□□□□ -0.72
SCAF11-205ENST00000465950 RASA3Q14644 834 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 RILPL1Q5EBL4 403 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 SAMD3Q8N6K7 520 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.55□□□□□ -0.72
SCAF11-205ENST00000465950 SKA1Q96BD8 255 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 SUCLG2Q96I99 432 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 UNC13BO14795 1591 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 N4BP1O75113 896 aaKnown RBP10.55□□□□□ -0.72
SCAF11-205ENST00000465950 KCNA4P22459 653 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 SEPT8Q92599 483 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 DDX50Q9BQ39 737 aaKnown RBP10.55□□□□□ -0.72
SCAF11-205ENST00000465950 ANO10Q9NW15 660 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 PARP2Q9UGN5 583 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 ZW10O43264 779 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 NR1H3Q13133 447 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 NLRP7Q8WX94 980 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 PHACTR3Q96KR7 559 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 MFSD1Q9H3U5 465 aa10.55□□□□□ -0.72
SCAF11-205ENST00000465950 PREX1Q8TCU6 1659 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 GLTPD2A6NH11 291 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 YEATS4O95619 227 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 CAVIN2O95810 425 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 TIMM10P62072 90 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 SP3Q02447 781 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 MECOMQ03112 1051 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 DMP1Q13316 513 aaPredicted RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 NKX1-1Q15270 411 aaPredicted RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 TDRD7Q8NHU6 1098 aaKnown RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 SYT17Q9BSW7 474 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 DSCC1Q9BVC3 393 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 GCOM2Q9BZD3 368 aaPredicted RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 SPATA31E1Q6ZUB1 1445 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 IQGAP3Q86VI3 1631 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 STAMBPO95630 424 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 GH1P01241 217 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 LIG4P49917 911 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 SPP2Q13103 211 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 ARHGAP15Q53QZ3 475 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 XKR9Q5GH70 373 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 NCAPH2Q6IBW4 605 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 LMBR1Q8WVP7 490 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 CTAGE1Q96RT6 745 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 TRIM62Q9BVG3 475 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 PTPRUQ92729 1446 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 TECPR2O15040 1411 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 PHKA2P46019 1235 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 CDCA7LQ96GN5 454 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 UPF3BQ9BZI7 483 aaKnown RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 C2orf40Q9H1Z8 148 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 ARGLU1Q9NWB6 273 aaPredicted RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 SRPRBQ9Y5M8 271 aaKnown RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 RRN3P2A6NIE6 340 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 PARNO95453 639 aaKnown RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 ARID4AP29374 1257 aaPredicted RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 KIAA1328Q86T90 577 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 IQUBQ8NA54 791 aa10.54□□□□□ -0.72
SCAF11-205ENST00000465950 PA2G4Q9UQ80 394 aaKnown RBP10.54□□□□□ -0.72
SCAF11-205ENST00000465950 SPATA31D1Q6ZQQ2 1576 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 K7ELQ4 463 aaPredicted RBP10.53□□□□□ -0.72
SCAF11-205ENST00000465950 DAPK3O43293 454 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 CHMP2AO43633 222 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 HARSP12081 509 aaKnown RBP10.53□□□□□ -0.72
SCAF11-205ENST00000465950 FERP16591 822 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 RNF219Q5W0B1 726 aaPredicted RBP10.53□□□□□ -0.72
SCAF11-205ENST00000465950 ARMCX2Q7L311 632 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 TTC39CQ8N584 583 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 OR6J1Q8NGC5 347 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 TEX13BQ9BXU2 312 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 SUGCTQ9HAC7 445 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 VWDEQ8N2E2 1590 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 HMGB1P1B2RPK0 211 aaPredicted RBP10.53□□□□□ -0.72
SCAF11-205ENST00000465950 STRNO43815 780 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 HDAC1Q13547 482 aaPredicted RBP10.53□□□□□ -0.72
SCAF11-205ENST00000465950 LETM2Q2VYF4 491 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 NBPF9Q3BBW0 867 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.53□□□□□ -0.72
SCAF11-205ENST00000465950 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
SCAF11-205ENST00000465950 ALCAMQ13740 583 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 NFKBIBQ15653 356 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 MIGA2Q7L4E1 593 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 MICALL1Q8N3F8 863 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 TBC1D16Q8TBP0 767 aa10.53□□□□□ -0.72
SCAF11-205ENST00000465950 TDRD3Q9H7E2 651 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms