RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 FDX1P10109 184 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 STAT3P40763 770 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 PRKCZQ05513 592 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 COL9A3Q14050 684 aaPredicted RBP16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 ADCK5Q3MIX3 580 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 TTBK2Q6IQ55 1244 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 BTNL9Q6UXG8 535 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 GPR142Q7Z601 462 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 PLEKHH3Q7Z736 793 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 REPS2Q8NFH8 660 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 TMEM87BQ96K49 555 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 SLC38A10Q9HBR0 1119 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 SENP2Q9HC62 589 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 GABRQQ9UN88 632 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 SNX14Q9Y5W7 946 aa16.99■□□□□ 0.31
SQSTM1-205ENST00000464493 SLC25A27O95847 323 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 ERCC3P19447 782 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 SLC16A2P36021 539 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 FLT3LGP49771 235 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 GPATCH4Q5T3I0 446 aaKnown RBP16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 WDR78Q5VTH9 848 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 TMTC2Q8N394 836 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 SHCBP1Q8NEM2 672 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 RAET1EQ8TD07 263 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 MROH8Q9H579 483 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 GJD2Q9UKL4 321 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 ZNF214Q9UL59 606 aaPredicted RBP16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 PRR12Q9ULL5 1215 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 PTCH2Q9Y6C5 1203 aa16.98■□□□□ 0.31
SQSTM1-205ENST00000464493 ATP2A1O14983 1001 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 HMGB1P09429 215 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 PARP1P09874 1014 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 GOLGA8HP0CJ92 632 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 DHX32Q7L7V1 743 aaKnown RBP16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 NCAPG2Q86XI2 1143 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 RIOX2Q8IUF8 465 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 CPXCR1Q8N123 301 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 ABHD8Q96I13 439 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 TEX13BQ9BXU2 312 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 LY9Q9HBG7 655 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 GPHNQ9NQX3 736 aaPredicted RBP16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 HPS5Q9UPZ3 1129 aa16.97■□□□□ 0.31
SQSTM1-205ENST00000464493 HTTP42858 3142 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 SH2B2O14492 632 aaPredicted RBP16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 LIFRP42702 1097 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 OAZ1P54368 228 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 EXOSC10Q01780 885 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 ASPRV1Q53RT3 343 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 SYDE2Q5VT97 1194 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 CATIPQ7Z7H3 387 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 JAKMIP1Q96N16 626 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 NUDT12Q9BQG2 462 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 LRRC2Q9BYS8 371 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 RAVER2Q9HCJ3 691 aaKnown RBP16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 IVNS1ABPQ9Y6Y0 642 aa16.96■□□□□ 0.31
SQSTM1-205ENST00000464493 WDR19Q8NEZ3 1342 aa16.96■□□□□ 0.3
SQSTM1-205ENST00000464493 CENPFP49454 3210 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 SLC15A5A6NIM6 579 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 STRNO43815 780 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 PTPREP23469 700 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 PSMA5P28066 241 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 COPB2P35606 906 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 SNAP25P60880 206 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 TROAPQ12815 778 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 IRF5Q13568 498 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 MORN1Q5T089 497 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 NFXL1Q6ZNB6 911 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 SOCS4Q8WXH5 440 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 UBA5Q9GZZ9 404 aa16.95■□□□□ 0.3
SQSTM1-205ENST00000464493 CCDC69A6NI79 296 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 SLC9C1Q4G0N8 1177 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 CCDC174Q6PII3 467 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 BLOC1S2Q6QNY1 142 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 NBPF11Q86T75 865 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 ZNF654Q8IZM8 581 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 USP6NLQ92738 828 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 TCEANC2Q96MN5 208 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 RANBP17Q9H2T7 1088 aaKnown RBP16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 MAD2L2Q9UI95 211 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 RIPK3Q9Y572 518 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 ZNF536O15090 1300 aa16.94■□□□□ 0.3
SQSTM1-205ENST00000464493 PLXNB2O15031 1838 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 PALM3A6NDB9 673 aaPredicted RBP16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 ADCY3O60266 1144 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 SEC24BO95487 1268 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 FCER1AP12319 257 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 CPA1P15085 419 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 CYP2B6P20813 491 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 GRK4P32298 578 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 RGS2P41220 211 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 GRB14Q14449 540 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 GRM4Q14833 912 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 STAG2Q8N3U4 1231 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 SLAIN1Q8ND83 568 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 PXYLP1Q8TE99 480 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 NUP133Q8WUM0 1156 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 AGBL1Q96MI9 1066 aa16.93■□□□□ 0.3
SQSTM1-205ENST00000464493 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms