RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ZNF579Q8NAF0 562 aaKnown RBP8.93□□□□□ -0.98
BRCC3-208ENST00000453705 RHPN1Q8TCX5 695 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 ZNF700Q9H0M5 742 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 ANTXR1Q9H6X2 564 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 DIAPH3Q9NSV4 1193 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 F8W031 263 aaPredicted RBP8.93□□□□□ -0.98
BRCC3-208ENST00000453705 PRPF40AO75400 957 aaKnown RBP8.93□□□□□ -0.98
BRCC3-208ENST00000453705 SDSP20132 328 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 PLA2G4AP47712 749 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 COBLL1Q53SF7 1204 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 ELOA2Q8IYF1 753 aaPredicted RBP8.93□□□□□ -0.98
BRCC3-208ENST00000453705 UPF1Q92900 1129 aaKnown RBP eCLIP8.93□□□□□ -0.98
BRCC3-208ENST00000453705 GPR108Q9NPR9 543 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 EGFL7Q9UHF1 273 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 FBXO10Q9UK96 956 aa8.93□□□□□ -0.98
BRCC3-208ENST00000453705 IRS4O14654 1257 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-208ENST00000453705 HPDP32754 393 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-208ENST00000453705 RFX5P48382 616 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-208ENST00000453705 UBASH3AP57075 661 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 NAA30Q147X3 362 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-208ENST00000453705 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
BRCC3-208ENST00000453705 ANKMY2Q8IV38 441 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 PI4K2BQ8TCG2 481 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 XAGE3Q8WTP9 111 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 ISCA1Q9BUE6 129 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 USP21Q9UK80 565 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 TMX2Q9Y320 296 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 CDHR2Q9BYE9 1310 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 REC8O95072 547 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 PARP10Q53GL7 1025 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 NBPF14Q5TI25 921 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 KIAA0825Q8IV33 1275 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 NBPF15Q8N660 670 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 CCDC191Q8NCU4 936 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 RPGRQ92834 1020 aaKnown RBP8.92□□□□□ -0.98
BRCC3-208ENST00000453705 ZNF396Q96N95 335 aaPredicted RBP8.92□□□□□ -0.98
BRCC3-208ENST00000453705 USP26Q9BXU7 913 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 XPO7Q9UIA9 1087 aaKnown RBP8.92□□□□□ -0.98
BRCC3-208ENST00000453705 USP16Q9Y5T5 823 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 IKBKGQ9Y6K9 419 aa8.92□□□□□ -0.98
BRCC3-208ENST00000453705 PRAMEF22A3QJZ6 481 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 KLF4O43474 513 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 TIPRLO75663 272 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 EHHADHQ08426 723 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 CHAF1AQ13111 956 aaPredicted RBP8.91□□□□□ -0.98
BRCC3-208ENST00000453705 STK3Q13188 491 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 SLC39A6Q13433 755 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 MTMR1Q13613 665 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 RABEP1Q15276 862 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 CCDC158Q5M9N0 1113 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 SLC10A5Q5PT55 438 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 C1orf122Q6ZSJ8 110 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 LHFPL2Q6ZUX7 228 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.91□□□□□ -0.98
BRCC3-208ENST00000453705 NBPF3Q9H094 633 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 CDV3Q9UKY7 258 aaKnown RBP8.91□□□□□ -0.98
BRCC3-208ENST00000453705 BTAF1O14981 1849 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 DOCK2Q92608 1830 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 ABCC12Q96J65 1359 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 ATRNO75882 1429 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 GFPT2O94808 682 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 SSBP05455 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
BRCC3-208ENST00000453705 MRE11P49959 708 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 GUCY2FP51841 1108 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 DMTNQ08495 405 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 APOBRQ0VD83 1088 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 TRIM14Q14142 442 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 RSRC2Q7L4I2 434 aaKnown RBP8.91□□□□□ -0.98
BRCC3-208ENST00000453705 COPS6Q7L5N1 327 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 ZNF354CQ86Y25 554 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 TPH2Q8IWU9 490 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 ENAHQ8N8S7 591 aaPredicted RBP8.91□□□□□ -0.98
BRCC3-208ENST00000453705 SUCLG2Q96I99 432 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 ZHX1Q9UKY1 873 aaPredicted RBP8.91□□□□□ -0.98
BRCC3-208ENST00000453705 KIAA1024Q9UPX6 916 aa8.91□□□□□ -0.98
BRCC3-208ENST00000453705 ERC2O15083 957 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 ECE1P42892 770 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 RAB33AQ14088 237 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 FAM133BQ5BKY9 247 aaKnown RBP8.9□□□□□ -0.98
BRCC3-208ENST00000453705 CCBE1Q6UXH8 406 aaPredicted RBP8.9□□□□□ -0.98
BRCC3-208ENST00000453705 VPS37DQ86XT2 251 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 THNSL2Q86YJ6 484 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 TRIML1Q8N9V2 468 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 GABPB2Q8TAK5 448 aaPredicted RBP8.9□□□□□ -0.98
BRCC3-208ENST00000453705 DDX54Q8TDD1 881 aaKnown RBP8.9□□□□□ -0.98
BRCC3-208ENST00000453705 HOOK2Q96ED9 719 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 MAP7D2Q96T17 732 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 GGT7Q9UJ14 662 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 AFF2P51816 1311 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 RAD50Q92878 1312 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 MYH14Q7Z406 1995 aaKnown RBP8.9□□□□□ -0.98
BRCC3-208ENST00000453705 GPR182O15218 404 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 SPTLC1O15269 473 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 SRGAP3O43295 1099 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 KIF1CO43896 1103 aaKnown RBP8.9□□□□□ -0.98
BRCC3-208ENST00000453705 ARSHQ5FYA8 562 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 FAM47EQ6ZV65 393 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 BRSK2Q8IWQ3 736 aa8.9□□□□□ -0.98
BRCC3-208ENST00000453705 WDR66Q8TBY9 1149 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms