RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SLC16A2P36021 539 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 FUT2Q10981 343 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 PABPC4Q13310 644 aaKnown RBP eCLIP16.99■□□□□ 0.31
SHANK2-210ENST00000449116 SYDE2Q5VT97 1194 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 GPAT2Q6NUI2 795 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 NBPF11Q86T75 865 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 CCDC82Q8N4S0 544 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 NSUN7Q8NE18 718 aaKnown RBP16.99■□□□□ 0.31
SHANK2-210ENST00000449116 BRI3BPQ8WY22 251 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 INTS4Q96HW7 963 aaKnown RBP16.99■□□□□ 0.31
SHANK2-210ENST00000449116 CPVLQ9H3G5 476 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 RIOX1Q9H6W3 641 aa16.99■□□□□ 0.31
SHANK2-210ENST00000449116 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.99■□□□□ 0.31
SHANK2-210ENST00000449116 PTPDC1A2A3K4 754 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 CYTH3O43739 400 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 HSP90AA1P07900 732 aaKnown RBP16.98■□□□□ 0.31
SHANK2-210ENST00000449116 SLC35G1Q2M3R5 365 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 ANKRD23Q86SG2 305 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 TRIM22Q8IYM9 498 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 SMARCC2Q8TAQ2 1214 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 PHKBQ93100 1093 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 RNF26Q9BY78 433 aaPredicted RBP16.98■□□□□ 0.31
SHANK2-210ENST00000449116 FBXO28Q9NVF7 368 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 SLC45A1Q9Y2W3 748 aa16.98■□□□□ 0.31
SHANK2-210ENST00000449116 BTBD19C9JJ37 291 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 FMNL1O95466 1100 aaPredicted RBP16.97■□□□□ 0.31
SHANK2-210ENST00000449116 INHBEP58166 350 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 SSRP1Q08945 709 aaKnown RBP16.97■□□□□ 0.31
SHANK2-210ENST00000449116 NOGQ13253 232 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 GRM1Q13255 1194 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 COG2Q14746 738 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 ADGRF4Q8IZF3 695 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 PRPF38AQ8NAV1 312 aaKnown RBP16.97■□□□□ 0.31
SHANK2-210ENST00000449116 KIFC2Q96AC6 838 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 CAPNS2Q96L46 248 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 SLC26A6Q9BXS9 759 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 JMJD4Q9H9V9 463 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 VAT1LQ9HCJ6 419 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 RBM27Q9P2N5 1060 aaKnown RBP16.97■□□□□ 0.31
SHANK2-210ENST00000449116 PPP1R9AQ9ULJ8 1098 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 PRR12Q9ULL5 1215 aa16.97■□□□□ 0.31
SHANK2-210ENST00000449116 MYPNQ86TC9 1320 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 STK36Q9NRP7 1315 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 PRPF3O43395 683 aaKnown RBP16.96■□□□□ 0.31
SHANK2-210ENST00000449116 JAK2O60674 1132 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 PPFIA3O75145 1194 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 OSBPP22059 807 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 DSG3P32926 999 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 IRX3P78415 501 aaPredicted RBP16.96■□□□□ 0.31
SHANK2-210ENST00000449116 HMGN5P82970 282 aaKnown RBP16.96■□□□□ 0.31
SHANK2-210ENST00000449116 AKAP17AQ02040 695 aaKnown RBP16.96■□□□□ 0.31
SHANK2-210ENST00000449116 SREBF2Q12772 1141 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 RRP36Q96EU6 259 aaKnown RBP16.96■□□□□ 0.31
SHANK2-210ENST00000449116 PTPN18Q99952 460 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 HOXC10Q9NYD6 342 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
SHANK2-210ENST00000449116 PNMA3Q9UL41 463 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 SMC3Q9UQE7 1217 aa16.96■□□□□ 0.31
SHANK2-210ENST00000449116 V9GY48 417 aaPredicted RBP16.96■□□□□ 0.31
SHANK2-210ENST00000449116 PDHXO00330 501 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 DEXIO95424 95 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 HSPA6P17066 643 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 HTRA3P83110 453 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 KIF23Q02241 960 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-210ENST00000449116 CDC37Q16543 378 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-210ENST00000449116 SAMD1Q6SPF0 538 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-210ENST00000449116 MTMR8Q96EF0 704 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 DDX11Q96FC9 970 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 PIGSQ96S52 555 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 ASCC2Q9H1I8 757 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-210ENST00000449116 RANBP17Q9H2T7 1088 aaKnown RBP16.95■□□□□ 0.3
SHANK2-210ENST00000449116 FOXD4L1Q9NU39 408 aa16.95■□□□□ 0.3
SHANK2-210ENST00000449116 ORC3Q9UBD5 711 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-210ENST00000449116 SEC63Q9UGP8 760 aaKnown RBP16.95■□□□□ 0.3
SHANK2-210ENST00000449116 SPDYE16A6NNV3 312 aaPredicted RBP16.94■□□□□ 0.3
SHANK2-210ENST00000449116 ZBTB5O15062 677 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 DTNBO60941 627 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 FDX1P10109 184 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 FDPSP14324 419 aaKnown RBP16.94■□□□□ 0.3
SHANK2-210ENST00000449116 HOMER1Q86YM7 354 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 REM2Q8IYK8 340 aaPredicted RBP16.94■□□□□ 0.3
SHANK2-210ENST00000449116 FAM43AQ8N2R8 423 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 PIBF1Q8WXW3 757 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 ATG4CQ96DT6 458 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 ZIC5Q96T25 663 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 P2RX7Q99572 595 aaKnown RBP16.94■□□□□ 0.3
SHANK2-210ENST00000449116 ZCCHC17Q9NP64 241 aaKnown RBP16.94■□□□□ 0.3
SHANK2-210ENST00000449116 ADAMTS5Q9UNA0 930 aa16.94■□□□□ 0.3
SHANK2-210ENST00000449116 WDR33Q9C0J8 1336 aaKnown RBP16.94■□□□□ 0.3
SHANK2-210ENST00000449116 PNMA6FA0A0J9YX94 578 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 hCG_1642624A0A1W2PR95 340 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 IGF2BP3O00425 579 aaKnown RBP eCLIP16.93■□□□□ 0.3
SHANK2-210ENST00000449116 VWA5AO00534 786 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 ZBED4O75132 1171 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 GJB2P29033 226 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 TM4SF4P48230 202 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 QRICH1Q2TAL8 776 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 OTUD7BQ6GQQ9 843 aa16.93■□□□□ 0.3
SHANK2-210ENST00000449116 LBX2Q6XYB7 198 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms