RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PDHBP11177 359 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 VCAM1P19320 739 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 HOXA7P31268 230 aaPredicted RBP8.82□□□□□ -1
AC004540.1-206ENST00000448056 SLC1A4P43007 532 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 APOBRQ0VD83 1088 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 TROAPQ12815 778 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 ANKRD1Q15327 319 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 TREML2Q5T2D2 321 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 SYNE3Q6ZMZ3 975 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 GADL1Q6ZQY3 521 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.82□□□□□ -1
AC004540.1-206ENST00000448056 ZNF654Q8IZM8 581 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 ZNF710Q8N1W2 664 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 DNAJC5GQ8N7S2 189 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 CHMP4CQ96CF2 233 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 AGTPBP1Q9UPW5 1226 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 MTMR7Q9Y216 660 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 DOCK1Q14185 1865 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 OTOFQ9HC10 1997 aa8.82□□□□□ -1
AC004540.1-206ENST00000448056 GREB1LQ9C091 1923 aaPredicted RBP8.82□□□□□ -1
AC004540.1-206ENST00000448056 KLF18A0A0U1RQI7 1052 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L15C9J2P7 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L13C9JLJ4 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L11C9JVI0 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L18D6R9N7 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L22D6RA61 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L17D6RBQ6 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L19D6RCP7 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L20D6RJB6 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 WDR46O15213 610 aaKnown RBP8.81□□□□□ -1
AC004540.1-206ENST00000448056 DDAH1O94760 285 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 CALM1P0DP23 149 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 CALM2P0DP24 149 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 CALM3P0DP25 149 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 SNHG28P0DPA3 235 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 BMP3P12645 472 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 PDIA3P30101 505 aaKnown RBP8.81□□□□□ -1
AC004540.1-206ENST00000448056 MLLT3P42568 568 aaPredicted RBP8.81□□□□□ -1
AC004540.1-206ENST00000448056 AK2P54819 239 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 USP17L24Q0WX57 530 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 SREBF2Q12772 1141 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 FAM83BQ5T0W9 1011 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 APOA5Q6Q788 366 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 CATSPERGQ6ZRH7 1159 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 ANKRD23Q86SG2 305 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 FAM43AQ8N2R8 423 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 FANCBQ8NB91 859 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 NUP133Q8WUM0 1156 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 DCAF4Q8WV16 495 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 ZNF274Q96GC6 653 aaPredicted RBP8.81□□□□□ -1
AC004540.1-206ENST00000448056 MAP3K14Q99558 947 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 NUP88Q99567 741 aaPredicted RBP8.81□□□□□ -1
AC004540.1-206ENST00000448056 MYL10Q9BUA6 226 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 RPAP3Q9H6T3 665 aaPredicted RBP8.81□□□□□ -1
AC004540.1-206ENST00000448056 SLC45A1Q9Y2W3 748 aa8.81□□□□□ -1
AC004540.1-206ENST00000448056 PHIPQ8WWQ0 1821 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 ATAD5Q96QE3 1844 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 MYH8P13535 1937 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 PALM3A6NDB9 673 aaPredicted RBP8.8□□□□□ -1
AC004540.1-206ENST00000448056 TMEM232C9JQI7 657 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 PDHXO00330 501 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 IGF2BP3O00425 579 aaKnown RBP eCLIP8.8□□□□□ -1
AC004540.1-206ENST00000448056 ZBTB43O43298 467 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 ST18O60284 1047 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 PLA2G6O60733 806 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 PARP1P09874 1014 aaKnown RBP8.8□□□□□ -1
AC004540.1-206ENST00000448056 GOLGA8HP0CJ92 632 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 HOXB1P14653 301 aaPredicted RBP8.8□□□□□ -1
AC004540.1-206ENST00000448056 OSBPP22059 807 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 RCAN1P53805 252 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 ZNF543Q08ER8 600 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 PABPC4Q13310 644 aaKnown RBP eCLIP8.8□□□□□ -1
AC004540.1-206ENST00000448056 COG2Q14746 738 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 GRM4Q14833 912 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 GPATCH4Q5T3I0 446 aaKnown RBP8.8□□□□□ -1
AC004540.1-206ENST00000448056 SMYD5Q6GMV2 418 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 OTUD7BQ6GQQ9 843 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 TTBK2Q6IQ55 1244 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 KCTD1Q719H9 257 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 RASGRP2Q7LDG7 609 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 STAG2Q8N3U4 1231 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 CHURC1Q8WUH1 139 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 KHSRPQ92945 711 aaKnown RBP eCLIP8.8□□□□□ -1
AC004540.1-206ENST00000448056 ZCCHC17Q9NP64 241 aaKnown RBP8.8□□□□□ -1
AC004540.1-206ENST00000448056 GPCPD1Q9NPB8 672 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 HOXC10Q9NYD6 342 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 MAD2L2Q9UI95 211 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 FEM1BQ9UK73 627 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 TPCN1Q9ULQ1 816 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 NAP1L2Q9ULW6 460 aaPredicted RBP8.8□□□□□ -1
AC004540.1-206ENST00000448056 LIMCH1Q9UPQ0 1083 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
AC004540.1-206ENST00000448056 FRMPD2Q68DX3 1309 aaPredicted RBP8.8□□□□□ -1
AC004540.1-206ENST00000448056 KLRF2D3W0D1 207 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 FLOT1O75955 427 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 RXRAP19793 462 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 KIF5BP33176 963 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 SLC16A2P36021 539 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 PPP2R5BQ15173 497 aa8.79□□□□□ -1
AC004540.1-206ENST00000448056 CCDC96Q2M329 555 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms