RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TFAP4Q01664 338 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 TMEM132BQ14DG7 1078 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 FAM47AQ5JRC9 791 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 CHD1LQ86WJ1 897 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 SLF1Q9BQI6 1058 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 HELLSQ9NRZ9 838 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 TOMM22Q9NS69 142 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 MTMR4Q9NYA4 1195 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 FLRT1Q9NZU1 646 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 NDUFB10O96000 172 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 NUCB1Q02818 461 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 KCTD2Q14681 263 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 HABP4Q5JVS0 413 aaKnown RBP10.38□□□□□ -0.75
USP6NL-203ENST00000443016 LRRC47Q8N1G4 583 aaKnown RBP10.38□□□□□ -0.75
USP6NL-203ENST00000443016 NPLOC4Q8TAT6 608 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 OGDHLQ9ULD0 1010 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 STX8Q9UNK0 236 aa10.38□□□□□ -0.75
USP6NL-203ENST00000443016 RANBP6O60518 1105 aaKnown RBP10.37□□□□□ -0.75
USP6NL-203ENST00000443016 SLC34A2O95436 690 aa10.37□□□□□ -0.75
USP6NL-203ENST00000443016 MCMDC2Q4G0Z9 681 aa10.37□□□□□ -0.75
USP6NL-203ENST00000443016 VPS53Q5VIR6 699 aa10.37□□□□□ -0.75
USP6NL-203ENST00000443016 CHRDL2Q6WN34 429 aa10.37□□□□□ -0.75
USP6NL-203ENST00000443016 PRPF38AQ8NAV1 312 aaKnown RBP10.37□□□□□ -0.75
USP6NL-203ENST00000443016 FAM227BQ96M60 508 aa10.37□□□□□ -0.75
USP6NL-203ENST00000443016 BRPF3Q9ULD4 1205 aa10.37□□□□□ -0.75
USP6NL-203ENST00000443016 COLQQ9Y215 455 aaPredicted RBP10.37□□□□□ -0.75
USP6NL-203ENST00000443016 PLXNB2O15031 1838 aa10.37□□□□□ -0.75
USP6NL-203ENST00000443016 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 IKQ13123 557 aaPredicted RBP10.36□□□□□ -0.75
USP6NL-203ENST00000443016 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 CPXCR1Q8N123 301 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 NEDD1Q8NHV4 660 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 KIFC2Q96AC6 838 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 CHMP4CQ96CF2 233 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 C11orf49Q9H6J7 331 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 ADAMTS5Q9UNA0 930 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 A0A0D9SFI3 127 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 MSCO60682 206 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 ZBED4O75132 1171 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 RIOX2Q8IUF8 465 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 ABRAQ8N0Z2 381 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 MMP19Q99542 508 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 TEX13BQ9BXU2 312 aa10.36□□□□□ -0.75
USP6NL-203ENST00000443016 IGKV6D-41A0A0C4DH26 115 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 COBLO75128 1261 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 COPB2P35606 906 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 RRP12Q5JTH9 1297 aaKnown RBP10.35□□□□□ -0.75
USP6NL-203ENST00000443016 SNRNP48Q6IEG0 339 aaKnown RBP10.35□□□□□ -0.75
USP6NL-203ENST00000443016 MKL1Q969V6 931 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 DDX20Q9UHI6 824 aaKnown RBP10.35□□□□□ -0.75
USP6NL-203ENST00000443016 ZNF214Q9UL59 606 aaPredicted RBP10.35□□□□□ -0.75
USP6NL-203ENST00000443016 PGK2P07205 417 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 BMP3P12645 472 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 NMIQ13287 307 aaPredicted RBP10.35□□□□□ -0.75
USP6NL-203ENST00000443016 OLFML2BQ68BL8 750 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 SLFN13Q68D06 897 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 LHX8Q68G74 356 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 TICAM2Q86XR7 235 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 DDX11Q96FC9 970 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 INCENPQ9NQS7 918 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 FEM1BQ9UK73 627 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 SYNPO2Q9UMS6 1093 aa10.35□□□□□ -0.75
USP6NL-203ENST00000443016 FOXP2O15409 715 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 FGAP02671 866 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 SLC1A4P43007 532 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 PLEKHM2Q8IWE5 1019 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 C7orf61Q8IZ16 206 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 GMCL1P1Q8NEA9 526 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 MAML3Q96JK9 1138 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 DIAPH3Q9NSV4 1193 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 TMEM232C9JQI7 657 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 TRAK2O60296 914 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 HSPD1P10809 573 aaKnown RBP10.34□□□□□ -0.75
USP6NL-203ENST00000443016 MCCP23508 829 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 STAT2P52630 851 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 ANO1Q5XXA6 986 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 ZNF589Q86UQ0 364 aaPredicted RBP10.34□□□□□ -0.75
USP6NL-203ENST00000443016 PLIN4Q96Q06 1357 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 CCDC171Q6TFL3 1326 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 RLFQ13129 1914 aa10.34□□□□□ -0.75
USP6NL-203ENST00000443016 LAMA2P24043 3122 aaKnown RBP10.33□□□□□ -0.76
USP6NL-203ENST00000443016 NMT2O60551 498 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 CYBAP13498 195 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 SDSP20132 328 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 MNX1P50219 401 aaPredicted RBP10.33□□□□□ -0.76
USP6NL-203ENST00000443016 HAND2P61296 217 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 CWC27Q6UX04 472 aaKnown RBP10.33□□□□□ -0.76
USP6NL-203ENST00000443016 CHURC1Q8WUH1 139 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 SENP6Q9GZR1 1112 aaPredicted RBP10.33□□□□□ -0.76
USP6NL-203ENST00000443016 RAVER2Q9HCJ3 691 aaKnown RBP10.33□□□□□ -0.76
USP6NL-203ENST00000443016 ANAPC4Q9UJX5 808 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.33□□□□□ -0.76
USP6NL-203ENST00000443016 ALX1Q15699 326 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 PRAMEF19Q5SWL8 479 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 ANKRD35Q8N283 1001 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 REPS2Q8NFH8 660 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 OSBPL3Q9H4L5 887 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 HOMER2Q9NSB8 354 aa10.33□□□□□ -0.76
USP6NL-203ENST00000443016 RBM27Q9P2N5 1060 aaKnown RBP10.33□□□□□ -0.76
USP6NL-203ENST00000443016 ZMYND8Q9ULU4 1186 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms