RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 PDE4BQ07343 736 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 KLRC3Q07444 240 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 TRIM60Q495X7 471 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 ZNF697Q5TEC3 545 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
PTPRE-203ENST00000442830 NUP133Q8WUM0 1156 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 MKL1Q969V6 931 aa16.46■□□□□ 0.23
PTPRE-203ENST00000442830 PRDM5Q9NQX1 630 aaPredicted RBP16.46■□□□□ 0.23
PTPRE-203ENST00000442830 CUL9Q8IWT3 2517 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 PATL2C9JE40 543 aaKnown RBP16.45■□□□□ 0.22
PTPRE-203ENST00000442830 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 DLL1O00548 723 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 SMARCA5O60264 1052 aaPredicted RBP16.45■□□□□ 0.22
PTPRE-203ENST00000442830 NDUFB10O96000 172 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 APPP05067 770 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 PGK2P07205 417 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 PRAMEF19Q5SWL8 479 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 ANO1Q5XXA6 986 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 MAMDC4Q6UXC1 1216 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 Q7L0L9 218 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 GMCL1P1Q8NEA9 526 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 CHST13Q8NET6 341 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 OSBP2Q969R2 916 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPRE-203ENST00000442830 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 FAM184BQ9ULE4 1060 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 MROH7Q68CQ1 1323 aa16.45■□□□□ 0.22
PTPRE-203ENST00000442830 CLTBP09497 229 aa16.44■□□□□ 0.22
PTPRE-203ENST00000442830 SPC25Q9HBM1 224 aa16.44■□□□□ 0.22
PTPRE-203ENST00000442830 MTMR4Q9NYA4 1195 aa16.44■□□□□ 0.22
PTPRE-203ENST00000442830 CLIP2Q9UDT6 1046 aa16.44■□□□□ 0.22
PTPRE-203ENST00000442830 LAMA2P24043 3122 aaKnown RBP16.43■□□□□ 0.22
PTPRE-203ENST00000442830 DNAJC25-GNG10A0A024R161 153 aa16.43■□□□□ 0.22
PTPRE-203ENST00000442830 TMEM265A0A087WTH1 108 aa16.43■□□□□ 0.22
PTPRE-203ENST00000442830 IGKV6D-41A0A0C4DH26 115 aa16.43■□□□□ 0.22
PTPRE-203ENST00000442830 ZNF865P0CJ78 1059 aaPredicted RBP16.43■□□□□ 0.22
PTPRE-203ENST00000442830 TSPY3P0CV98 308 aa16.43■□□□□ 0.22
PTPRE-203ENST00000442830 TSPY8P0CW00 308 aa16.43■□□□□ 0.22
PTPRE-203ENST00000442830 SMAD3P84022 425 aaKnown RBP16.43■□□□□ 0.22
PTPRE-203ENST00000442830 TOX2Q96NM4 488 aa16.43■□□□□ 0.22
PTPRE-203ENST00000442830 SLC38A10Q9HBR0 1119 aa16.43■□□□□ 0.22
PTPRE-203ENST00000442830 ZBTB47Q9UFB7 747 aaPredicted RBP16.43■□□□□ 0.22
PTPRE-203ENST00000442830 A0A0C4DFX4 3053 aa16.43■□□□□ 0.22
PTPRE-203ENST00000442830 MCM3APO60318 1980 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 A0A1W2PQ45 241 aaPredicted RBP16.42■□□□□ 0.22
PTPRE-203ENST00000442830 A0A1W2PQY0 241 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 DCDC2CA8MYV0 355 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 SMIM22K7EJ46 135 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 DUSP11O75319 330 aaKnown RBP16.42■□□□□ 0.22
PTPRE-203ENST00000442830 CHGBP05060 677 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 CST5P28325 142 aaPredicted RBP16.42■□□□□ 0.22
PTPRE-203ENST00000442830 TLE2Q04725 743 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 CCDC174Q6PII3 467 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 FAM160B2Q86V87 743 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 PCSK9Q8NBP7 692 aaKnown RBP16.42■□□□□ 0.22
PTPRE-203ENST00000442830 NEDD1Q8NHV4 660 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 BADQ92934 168 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 FERMT2Q96AC1 680 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 NAPBQ9H115 298 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 ABHD16BQ9H3Z7 469 aa16.42■□□□□ 0.22
PTPRE-203ENST00000442830 KIAA0355O15063 1070 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 ADAMTS4O75173 837 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 PGK1P00558 417 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 STAT2P52630 851 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 TKFCQ3LXA3 575 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 ANKRD33Q7Z3H0 272 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 TICAM2Q86XR7 235 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 ANKRD35Q8N283 1001 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 KIFC2Q96AC6 838 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 CEP95Q96GE4 821 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 NUP88Q99567 741 aaPredicted RBP16.41■□□□□ 0.22
PTPRE-203ENST00000442830 FSD1Q9BTV5 496 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 EPB41L4AQ9HCS5 686 aaPredicted RBP16.41■□□□□ 0.22
PTPRE-203ENST00000442830 STARD7Q9NQZ5 370 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 ELP1O95163 1332 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 SYNRGQ9UMZ2 1314 aa16.41■□□□□ 0.22
PTPRE-203ENST00000442830 PLA2G6O60733 806 aa16.4■□□□□ 0.22
PTPRE-203ENST00000442830 BMP3P12645 472 aa16.4■□□□□ 0.22
PTPRE-203ENST00000442830 RAG1P15918 1043 aa16.4■□□□□ 0.22
PTPRE-203ENST00000442830 ACLYP53396 1101 aa16.4■□□□□ 0.22
PTPRE-203ENST00000442830 SHHQ15465 462 aa16.4■□□□□ 0.22
PTPRE-203ENST00000442830 CPXCR1Q8N123 301 aa16.4■□□□□ 0.22
PTPRE-203ENST00000442830 GMCL1Q96IK5 515 aa16.4■□□□□ 0.22
PTPRE-203ENST00000442830 GLT1D1Q96MS3 346 aa16.4■□□□□ 0.22
PTPRE-203ENST00000442830 ZHX1Q9UKY1 873 aaPredicted RBP16.4■□□□□ 0.22
PTPRE-203ENST00000442830 TRIM43BA6NCK2 446 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 M0R2C6 588 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 ACVR2BQ13705 512 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 SLFN13Q68D06 897 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 STK11IPQ8N1F8 1099 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 TRIM43Q96BQ3 446 aaPredicted RBP16.39■□□□□ 0.21
PTPRE-203ENST00000442830 SEZ6LQ9BYH1 1024 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 ACAD9Q9H845 621 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 TMEM39AQ9NV64 488 aa16.39■□□□□ 0.21
PTPRE-203ENST00000442830 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms