RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 EFCC1Q9HA90 598 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
SCAF4-203ENST00000434667 JAG2Q9Y219 1238 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 CDHR2Q9BYE9 1310 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 ERCC5P28715 1186 aaPredicted RBP11.75□□□□□ -0.53
SCAF4-203ENST00000434667 APBA1Q02410 837 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 RASGRF1Q13972 1273 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 AKNAD1Q5T1N1 836 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 CYP26C1Q6V0L0 522 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 DNAJC10Q8IXB1 793 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 IQUBQ8NA54 791 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 BCAS4Q8TDM0 211 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 LRRC1Q9BTT6 524 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 ACBD3Q9H3P7 528 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 SAR1BQ9Y6B6 198 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 MYO1FO00160 1098 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 TTF1Q15361 905 aaPredicted RBP11.75□□□□□ -0.53
SCAF4-203ENST00000434667 TCP11X2Q5H9J9 407 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 UIMC1Q96RL1 719 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 TBC1D2BQ9UPU7 963 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 RIPOR2Q9Y4F9 1068 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 SPATA31A3Q5VYP0 1347 aa11.75□□□□□ -0.53
SCAF4-203ENST00000434667 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 GNGT1P63211 74 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 PIP4K2BP78356 416 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 TRADDQ15628 312 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 CEP57Q86XR8 500 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 IRF2BP1Q8IU81 584 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 TSEN2Q8NCE0 465 aaKnown RBP11.74□□□□□ -0.53
SCAF4-203ENST00000434667 SPATA20Q8TB22 786 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 TMEM87BQ96K49 555 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 TCRBV5S4A2TA0A5A2 114 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 GOLGA6CA6NDK9 693 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 PPFIA4O75335 1185 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 GOLGA6DP0CG33 693 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 IDEP14735 1019 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 IRAK1P51617 712 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 WHAMMP3Q1A5X7 153 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 TRAPPC11Q7Z392 1133 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 TMTC1Q8IUR5 882 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 GOLGA6AQ9NYA3 693 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 CIAO1O76071 339 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 KIAA0754O94854 1291 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 PKN1Q16512 942 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 DNAAF5Q86Y56 855 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 MS4A14Q96JA4 679 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 ASAP1Q9ULH1 1129 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 FAM169AQ9Y6X4 670 aa11.74□□□□□ -0.53
SCAF4-203ENST00000434667 SOS2Q07890 1332 aaPredicted RBP11.74□□□□□ -0.53
SCAF4-203ENST00000434667 ECM2O94769 699 aaPredicted RBP11.73□□□□□ -0.53
SCAF4-203ENST00000434667 KRT14P02533 472 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 PARP1P09874 1014 aaKnown RBP11.73□□□□□ -0.53
SCAF4-203ENST00000434667 NFRKBQ6P4R8 1299 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 TADA2BQ86TJ2 420 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 SGMS1Q86VZ5 419 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 UBAC1Q9BSL1 405 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 TNKSO95271 1327 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 PAK1Q13153 545 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 ODF2Q5BJF6 829 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 FAM47AQ5JRC9 791 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 CCDC70Q6NSX1 233 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.532e-6■■■□□ 16.4
SCAF4-203ENST00000434667 LRWD1Q9UFC0 647 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 CAPN6Q9Y6Q1 641 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 ERICH2A1L162 156 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 HGSO14964 777 aaPredicted RBP11.73□□□□□ -0.53
SCAF4-203ENST00000434667 DEXIO95424 95 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
SCAF4-203ENST00000434667 FOXP1Q9H334 677 aaPredicted RBP11.73□□□□□ -0.53
SCAF4-203ENST00000434667 GOLGA6BA6NDN3 693 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 MOCS3O95396 460 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 EIF5P55010 431 aaKnown RBP11.72□□□□□ -0.53
SCAF4-203ENST00000434667 DYNLL1P63167 89 aaKnown RBP11.72□□□□□ -0.53
SCAF4-203ENST00000434667 PROSER2Q86WR7 435 aaPredicted RBP11.72□□□□□ -0.53
SCAF4-203ENST00000434667 LAMB1P07942 1786 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 DDX60LQ5H9U9 1706 aaKnown RBP11.72□□□□□ -0.53
SCAF4-203ENST00000434667 TTC38Q5R3I4 469 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 FAM76AQ8TAV0 307 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 PPM1EQ8WY54 764 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
SCAF4-203ENST00000434667 LUC7L2Q9Y383 392 aaKnown RBP11.72□□□□□ -0.53
SCAF4-203ENST00000434667 FRMD3A2A2Y4 597 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 POTEB2H3BUK9 544 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 ZNF263O14978 683 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 ERLIN2O94905 339 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 KCNV1Q6PIU1 500 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 SPATA5Q8NB90 893 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 LRRC15Q8TF66 581 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 NAA15Q9BXJ9 866 aaKnown RBP11.72□□□□□ -0.53
SCAF4-203ENST00000434667 CPVLQ9H3G5 476 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 ATRNO75882 1429 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
SCAF4-203ENST00000434667 BUB1O43683 1085 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 TRIM21P19474 475 aaKnown RBP11.71□□□□□ -0.53
SCAF4-203ENST00000434667 GUCY2FP51841 1108 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 SEC24CP53992 1094 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 SH3RF1Q7Z6J0 888 aa11.71□□□□□ -0.53
SCAF4-203ENST00000434667 ANKLE2Q86XL3 938 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms