RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 hCG_1984214I3L0E3 225 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 STXBP3O00186 592 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 TEX33O43247 280 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 IL1R1P14778 569 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 FECHP22830 423 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 PPP1R2P41236 205 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 BTDP43251 543 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 GNG11P61952 73 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 TUBB2AQ13885 445 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
CD44-210ENST00000434472 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 UBXN4Q92575 508 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 GPKOWQ92917 476 aaPredicted RBP eCLIP11.77□□□□□ -0.53
CD44-210ENST00000434472 TUBB2BQ9BVA1 445 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 C6orf50Q9HD87 102 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 CD209Q9NNX6 404 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 DISC1Q9NRI5 854 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 GGA1Q9UJY5 639 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 USP21Q9UK80 565 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 JAG2Q9Y219 1238 aa11.77□□□□□ -0.53
CD44-210ENST00000434472 SBF2Q86WG5 1849 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 TAF1LQ8IZX4 1826 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 SPATA31A6Q5VVP1 1343 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 FAM205AQ6ZU69 1335 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 USP17L3A6NCW0 530 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 USP17L4A6NCW7 530 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 EFCAB8A8MWE9 144 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 KLRF2D3W0D1 207 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 MFAP3LO75121 409 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 BBOX1O75936 387 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 PARP1P09874 1014 aaKnown RBP11.76□□□□□ -0.53
CD44-210ENST00000434472 CASP1P29466 404 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 GNA11P29992 359 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 UBA7P41226 1012 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 COPB1P53618 953 aaKnown RBP11.76□□□□□ -0.53
CD44-210ENST00000434472 GPSM2P81274 684 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 RBL2Q08999 1139 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 KMT5BQ4FZB7 885 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 UTP14CQ5TAP6 766 aaKnown RBP11.76□□□□□ -0.53
CD44-210ENST00000434472 SOGA3Q5TF21 947 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 FAM196AQ6ZSG2 479 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 TOGARAM2Q6ZUX3 1019 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 USP17L1Q7RTZ2 530 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 TMC4Q7Z404 712 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 HEATR3Q7Z4Q2 680 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 TMTC1Q8IUR5 882 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 MAPKAPK5Q8IW41 473 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 TEX11Q8IYF3 940 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 RRP36Q96EU6 259 aaKnown RBP11.76□□□□□ -0.53
CD44-210ENST00000434472 BLZF1Q9H2G9 400 aa11.76□□□□□ -0.53
CD44-210ENST00000434472 SPDYE4A6NLX3 237 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 N4BP3O15049 544 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 UFL1O94874 794 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 H2AFXP16104 143 aaPredicted RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 HMGB2P26583 209 aaKnown RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 CDK8P49336 464 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 BMS1Q14692 1282 aaKnown RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 NONOQ15233 471 aaKnown RBP eCLIP11.75□□□□□ -0.53
CD44-210ENST00000434472 KRT31Q15323 416 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 DIXDC1Q155Q3 683 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 PTPN21Q16825 1174 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 PRR5LQ6MZQ0 368 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 FBXO38Q6PIJ6 1188 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 SMYD4Q8IYR2 804 aaPredicted RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 RASSF8Q8NHQ8 419 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 EYA3Q99504 573 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 ZMYND12Q9H0C1 365 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 PODXL2Q9NZ53 605 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.75□□□□□ -0.53
CD44-210ENST00000434472 STX8Q9UNK0 236 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 TTF2Q9UNY4 1162 aaKnown RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 V9GYY5 206 aaPredicted RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 TADA3O75528 432 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 VEGFAP15692 232 aaPredicted RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 EEF1GP26641 437 aaKnown RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 HOXA7P31268 230 aaPredicted RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 NAPAP54920 295 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 TUBB4BP68371 445 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 GABPB1Q06547 395 aaPredicted RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 KARSQ15046 597 aaKnown RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 ERCC6LQ2NKX8 1250 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 TCP11X2Q5H9J9 407 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 ADSSL1Q8N142 457 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 KRT222Q8N1A0 295 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 STAMQ92783 540 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 MTRQ99707 1265 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 THAP9Q9H5L6 903 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 SEC63Q9UGP8 760 aaKnown RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 SAP30BPQ9UHR5 308 aaKnown RBP11.75□□□□□ -0.53
CD44-210ENST00000434472 ADGRG1Q9Y653 693 aa11.75□□□□□ -0.53
CD44-210ENST00000434472 ESYT2A0FGR8 921 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 PSMA7O14818 248 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 CYTH3O43739 400 aa11.74□□□□□ -0.53
CD44-210ENST00000434472 KIF5CO60282 957 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms