RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.13□□□□□ -0.95
VTI1A-202ENST00000432306 TMEM134Q9H6X4 195 aa9.13□□□□□ -0.95
VTI1A-202ENST00000432306 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.13□□□□□ -0.95
VTI1A-202ENST00000432306 MKRN1Q9UHC7 482 aaKnown RBP9.13□□□□□ -0.95
VTI1A-202ENST00000432306 BTBD11A6QL63 1104 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 VGLL3A8MV65 326 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 DHX16O60231 1041 aaKnown RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 AP1G2O75843 785 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 SEC31AO94979 1220 aaKnown RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 CPP00450 1065 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 IGKV5-2P06315 115 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 MMP10P09238 476 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 TOP1P11387 765 aaKnown RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 VDRP11473 427 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 ZNF18P17022 549 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 MAPK1P28482 360 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 HTRA3P83110 453 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 CEBPZQ03701 1054 aaKnown RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 APOBRQ0VD83 1088 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 STK38Q15208 465 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 CWF19L2Q2TBE0 894 aaKnown RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 NBPF6Q5VWK0 638 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 ANO1Q5XXA6 986 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 AMIGO3Q86WK7 504 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 CEP112Q8N8E3 955 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 PRR7Q8TB68 274 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 NBPF4Q96M43 638 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 UTP14AQ9BVJ6 771 aaKnown RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 NAA15Q9BXJ9 866 aaKnown RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 LGR6Q9HBX8 967 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 ANAPC4Q9UJX5 808 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 L1RE1Q9UN81 338 aa9.12□□□□□ -0.95
VTI1A-202ENST00000432306 TTF2Q9UNY4 1162 aaKnown RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 SIPA1L3O60292 1781 aaPredicted RBP9.12□□□□□ -0.95
VTI1A-202ENST00000432306 E7EWF7 191 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 GOLIM4O00461 696 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 NPHP1O15259 732 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 RNMTO43148 476 aaKnown RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 ATP9BO43861 1147 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 LDHAP00338 332 aaKnown RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 ATP1A3P13637 1013 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 CD46P15529 392 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 PFKFB1P16118 471 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 AMPD3Q01432 767 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 ARID5AQ03989 594 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 PTPN12Q05209 780 aaKnown RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 MAPRE1Q15691 268 aaKnown RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 CCDC174Q6PII3 467 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 SRGAP1Q7Z6B7 1085 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 USHBP1Q8N6Y0 703 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 TC2NQ8N9U0 490 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 SMC1BQ8NDV3 1235 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 CLP1Q92989 425 aaKnown RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 RNF34Q969K3 372 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 BAG1Q99933 345 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 ACBD3Q9H3P7 528 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 CASS4Q9NQ75 786 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 CCDC87Q9NVE4 849 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 INTS13Q9NVM9 706 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 CLIC4Q9Y696 253 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 C4AP0C0L4 1744 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 DDX60Q8IY21 1712 aaKnown RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 A0A087WWV3 80 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 LOC102724428A0A0B4J2F2 783 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 A0A0G2JLW4 131 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 NEURL1BA8MQ27 555 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 H3BQF6 201 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 IFRD1O00458 451 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 POLR3GO15318 223 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 KCNQ3O43525 872 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 CUTAO60888 179 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 USP17L8P0C7I0 530 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 COL6A1P12109 1028 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 MAGEA9P43362 315 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 SIK1P57059 783 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 KIF23Q02241 960 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 TEFQ10587 303 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 GCKRQ14397 625 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 SETDB1Q15047 1291 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 PLEKHO1Q53GL0 409 aaPredicted RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 DMRTA1Q5VZB9 504 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 HDXQ7Z353 690 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 TRIML1Q8N9V2 468 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 CCDC191Q8NCU4 936 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 ENOX1Q8TC92 643 aaKnown RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 DPF2Q92785 391 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 MARVELD3Q96A59 401 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 PANX2Q96RD6 677 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 WDR24Q96S15 920 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 VIPAS39Q9H9C1 493 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 EGFL7Q9UHF1 273 aa9.11□□□□□ -0.95
VTI1A-202ENST00000432306 RRP15Q9Y3B9 282 aaKnown RBP9.11□□□□□ -0.95
VTI1A-202ENST00000432306 KCPQ6ZWJ8 1503 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 ERLIN1O75477 346 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 HSPA1AP0DMV8 641 aaKnown RBP9.1□□□□□ -0.95
VTI1A-202ENST00000432306 HSPA1BP0DMV9 641 aaKnown RBP9.1□□□□□ -0.95
VTI1A-202ENST00000432306 PTPAQ15257 358 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 PROSER3Q2NL68 480 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 RESP18Q5W5W9 173 aa9.1□□□□□ -0.95
VTI1A-202ENST00000432306 SPECC1LQ69YQ0 1117 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms