RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 MYL10Q9BUA6 226 aa29.39■■■□□ 2.3
CPNE1-212ENST00000430570 PORCNQ9H237 461 aa29.39■■■□□ 2.3
CPNE1-212ENST00000430570 CPVLQ9H3G5 476 aa29.39■■■□□ 2.3
CPNE1-212ENST00000430570 PRR12Q9ULL5 1215 aa29.39■■■□□ 2.3
CPNE1-212ENST00000430570 PARP1P09874 1014 aaKnown RBP29.38■■■□□ 2.29
CPNE1-212ENST00000430570 SNAP25P60880 206 aa29.38■■■□□ 2.29
CPNE1-212ENST00000430570 KIF22Q14807 665 aa29.38■■■□□ 2.29
CPNE1-212ENST00000430570 NFXL1Q6ZNB6 911 aa29.38■■■□□ 2.29
CPNE1-212ENST00000430570 CATIPQ7Z7H3 387 aa29.38■■■□□ 2.29
CPNE1-212ENST00000430570 ZNF654Q8IZM8 581 aa29.38■■■□□ 2.29
CPNE1-212ENST00000430570 TM6SF1Q9BZW5 370 aa29.38■■■□□ 2.29
CPNE1-212ENST00000430570 UBA5Q9GZZ9 404 aa29.38■■■□□ 2.29
CPNE1-212ENST00000430570 CCDC69A6NI79 296 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 ANAPC15P60006 121 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 PLS1Q14651 629 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 GPATCH4Q5T3I0 446 aaKnown RBP29.37■■■□□ 2.29
CPNE1-212ENST00000430570 Q6ZUG5 572 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 RUFY3Q7L099 469 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 MOV10L1Q9BXT6 1211 aaKnown RBP29.37■■■□□ 2.29
CPNE1-212ENST00000430570 UPF3BQ9BZI7 483 aaKnown RBP29.37■■■□□ 2.29
CPNE1-212ENST00000430570 SPATC1LQ9H0A9 340 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 EFCC1Q9HA90 598 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 SLC38A10Q9HBR0 1119 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 MAD2L2Q9UI95 211 aa29.37■■■□□ 2.29
CPNE1-212ENST00000430570 ZNF214Q9UL59 606 aaPredicted RBP29.37■■■□□ 2.29
CPNE1-212ENST00000430570 MGAMO43451 1857 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 ZBED4O75132 1171 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 FMNL1O95466 1100 aaPredicted RBP29.36■■■□□ 2.29
CPNE1-212ENST00000430570 GRM4Q14833 912 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 ASPRV1Q53RT3 343 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 COL13A1Q5TAT6 717 aaPredicted RBP29.36■■■□□ 2.29
CPNE1-212ENST00000430570 SYDE2Q5VT97 1194 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 OTOP1Q7RTM1 612 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 SGMS1Q86VZ5 419 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 RAB11FIP4Q86YS3 637 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 NUP133Q8WUM0 1156 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 BRPF3Q9ULD4 1205 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 TRIM17Q9Y577 477 aa29.36■■■□□ 2.29
CPNE1-212ENST00000430570 PALM3A6NDB9 673 aaPredicted RBP29.35■■■□□ 2.29
CPNE1-212ENST00000430570 FCGRTP55899 365 aa29.35■■■□□ 2.29
CPNE1-212ENST00000430570 CPXCR1Q8N123 301 aa29.35■■■□□ 2.29
CPNE1-212ENST00000430570 IL17RAQ96F46 866 aa29.35■■■□□ 2.29
CPNE1-212ENST00000430570 RAVER2Q9HCJ3 691 aaKnown RBP29.35■■■□□ 2.29
CPNE1-212ENST00000430570 RXRAP19793 462 aa29.34■■■□□ 2.29
CPNE1-212ENST00000430570 CTU1Q7Z7A3 348 aaKnown RBP29.34■■■□□ 2.29
CPNE1-212ENST00000430570 CYP46A1Q9Y6A2 500 aa29.34■■■□□ 2.29
CPNE1-212ENST00000430570 DDAH1O94760 285 aa29.33■■■□□ 2.29
CPNE1-212ENST00000430570 STAT3P40763 770 aa29.33■■■□□ 2.29
CPNE1-212ENST00000430570 CCNA1P78396 465 aa29.33■■■□□ 2.29
CPNE1-212ENST00000430570 SLC12A7Q9Y666 1083 aa29.33■■■□□ 2.29
CPNE1-212ENST00000430570 ZNF536O15090 1300 aa29.32■■■□□ 2.28
CPNE1-212ENST00000430570 DOCK3Q8IZD9 2030 aa29.32■■■□□ 2.28
CPNE1-212ENST00000430570 TNPO2O14787 897 aaKnown RBP29.32■■■□□ 2.28
CPNE1-212ENST00000430570 FGD1P98174 961 aa29.32■■■□□ 2.28
CPNE1-212ENST00000430570 BRF1Q92994 677 aa29.32■■■□□ 2.28
CPNE1-212ENST00000430570 AGXT2Q9BYV1 514 aa29.32■■■□□ 2.28
CPNE1-212ENST00000430570 RANBP17Q9H2T7 1088 aaKnown RBP29.32■■■□□ 2.28
CPNE1-212ENST00000430570 RIPK3Q9Y572 518 aa29.32■■■□□ 2.28
CPNE1-212ENST00000430570 CTDP1Q9Y5B0 961 aaPredicted RBP29.32■■■□□ 2.28
CPNE1-212ENST00000430570 KLRF2D3W0D1 207 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 ATP2A1O14983 1001 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 FDX1P10109 184 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 ERCC3P19447 782 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 APOBRQ0VD83 1088 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 SLC35G1Q2M3R5 365 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 CCDC174Q6PII3 467 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 RIOX2Q8IUF8 465 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 CCDC144CPQ8IYA2 1237 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 FBXL16Q8N461 479 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 GABRQQ9UN88 632 aa29.31■■■□□ 2.28
CPNE1-212ENST00000430570 MAPK4P31152 587 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 SLC4A3P48751 1232 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 ARHGEF6Q15052 776 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 APOA5Q6Q788 366 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 GPR142Q7Z601 462 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 NBPF11Q86T75 865 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 NCAPG2Q86XI2 1143 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 CCAR1Q8IX12 1150 aaKnown RBP29.3■■■□□ 2.28
CPNE1-212ENST00000430570 ADGRF4Q8IZF3 695 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 MAP3K14Q99558 947 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 BACH2Q9BYV9 841 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 C22orf23Q9BZE7 217 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 VAT1LQ9HCJ6 419 aa29.3■■■□□ 2.28
CPNE1-212ENST00000430570 KLF18A0A0U1RQI7 1052 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 TAL1P17542 331 aaPredicted RBP29.29■■■□□ 2.28
CPNE1-212ENST00000430570 TOB2Q14106 344 aaPredicted RBP29.29■■■□□ 2.28
CPNE1-212ENST00000430570 WDR78Q5VTH9 848 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 SNRNP48Q6IEG0 339 aaKnown RBP29.29■■■□□ 2.28
CPNE1-212ENST00000430570 MICU3Q86XE3 530 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 SHCBP1Q8NEM2 672 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 AGBL1Q96MI9 1066 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 TEX13BQ9BXU2 312 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 PDRG1Q9NUG6 133 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 SRRDQ9UH36 339 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 GJD2Q9UKL4 321 aa29.29■■■□□ 2.28
CPNE1-212ENST00000430570 GNRH1P01148 92 aa29.28■■■□□ 2.28
CPNE1-212ENST00000430570 OAZ1P54368 228 aa29.28■■■□□ 2.28
CPNE1-212ENST00000430570 PRKCZQ05513 592 aa29.28■■■□□ 2.28
CPNE1-212ENST00000430570 PLEKHH3Q7Z736 793 aa29.28■■■□□ 2.28
CPNE1-212ENST00000430570 CTCFLQ8NI51 663 aaPredicted RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms