RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 OLFML2BQ68BL8 750 aa20.79■□□□□ 0.92
NUP50-208ENST00000430547 SNRNP48Q6IEG0 339 aaKnown RBP20.79■□□□□ 0.92
NUP50-208ENST00000430547 NR2E3Q9Y5X4 410 aa20.79■□□□□ 0.92
NUP50-208ENST00000430547 CEP290O15078 2479 aa20.79■□□□□ 0.92
NUP50-208ENST00000430547 ALPK3Q96L96 1907 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 NMT2O60551 498 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 MSCO60682 206 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 PCP11498 1178 aaKnown RBP20.78■□□□□ 0.92
NUP50-208ENST00000430547 STAT2P52630 851 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 MFSD6Q6ZSS7 791 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 CPXCR1Q8N123 301 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 REPS2Q8NFH8 660 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 DIS3LQ8TF46 1054 aaKnown RBP20.78■□□□□ 0.92
NUP50-208ENST00000430547 GMCL1Q96IK5 515 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 NBPF3Q9H094 633 aa20.78■□□□□ 0.92
NUP50-208ENST00000430547 RNF41Q9H4P4 317 aaPredicted RBP20.78■□□□□ 0.92
NUP50-208ENST00000430547 TMEM232C9JQI7 657 aa20.77■□□□□ 0.92
NUP50-208ENST00000430547 ZNF213O14771 459 aa20.77■□□□□ 0.92
NUP50-208ENST00000430547 COBLO75128 1261 aa20.77■□□□□ 0.92
NUP50-208ENST00000430547 FGRP09769 529 aa20.77■□□□□ 0.92
NUP50-208ENST00000430547 FAM160B2Q86V87 743 aa20.77■□□□□ 0.92
NUP50-208ENST00000430547 CHURC1Q8WUH1 139 aa20.77■□□□□ 0.92
NUP50-208ENST00000430547 CHMP4CQ96CF2 233 aa20.77■□□□□ 0.92
NUP50-208ENST00000430547 IL17RBQ9NRM6 502 aa20.77■□□□□ 0.92
NUP50-208ENST00000430547 H0YGN5 161 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 EVI5O60447 810 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 FDX1P10109 184 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 MCCP23508 829 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 PDE4AP27815 886 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 AKNAD1Q5T1N1 836 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 TTC22Q5TAA0 569 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 MAML3Q96JK9 1138 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 C11orf49Q9H6J7 331 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 SLC38A10Q9HBR0 1119 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 MTMR7Q9Y216 660 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 TACC3Q9Y6A5 838 aa20.76■□□□□ 0.91
NUP50-208ENST00000430547 ATP2A1O14983 1001 aa20.75■□□□□ 0.91
NUP50-208ENST00000430547 PGK2P07205 417 aa20.75■□□□□ 0.91
NUP50-208ENST00000430547 CYBAP13498 195 aa20.75■□□□□ 0.91
NUP50-208ENST00000430547 LHX8Q68G74 356 aa20.75■□□□□ 0.91
NUP50-208ENST00000430547 STAG1Q8WVM7 1258 aa20.75■□□□□ 0.91
NUP50-208ENST00000430547 DDX11Q96FC9 970 aa20.75■□□□□ 0.91
NUP50-208ENST00000430547 RAVER2Q9HCJ3 691 aaKnown RBP20.75■□□□□ 0.91
NUP50-208ENST00000430547 DDX20Q9UHI6 824 aaKnown RBP20.75■□□□□ 0.91
NUP50-208ENST00000430547 OAZ1P54368 228 aa20.74■□□□□ 0.91
NUP50-208ENST00000430547 CCDC96Q2M329 555 aa20.74■□□□□ 0.91
NUP50-208ENST00000430547 ESR2Q92731 530 aa20.74■□□□□ 0.91
NUP50-208ENST00000430547 FBXO40Q9UH90 709 aa20.74■□□□□ 0.91
NUP50-208ENST00000430547 TOP1P11387 765 aaKnown RBP20.73■□□□□ 0.91
NUP50-208ENST00000430547 GSPT1P15170 499 aaKnown RBP20.73■□□□□ 0.91
NUP50-208ENST00000430547 RCSD1Q6JBY9 416 aa20.73■□□□□ 0.91
NUP50-208ENST00000430547 KCTD1Q719H9 257 aa20.73■□□□□ 0.91
NUP50-208ENST00000430547 TBC1D10CQ8IV04 446 aa20.73■□□□□ 0.91
NUP50-208ENST00000430547 DCAF4Q8WV16 495 aa20.73■□□□□ 0.91
NUP50-208ENST00000430547 DSCC1Q9BVC3 393 aa20.73■□□□□ 0.91
NUP50-208ENST00000430547 TCP11L1Q9NUJ3 509 aa20.73■□□□□ 0.91
NUP50-208ENST00000430547 CTNNA3Q9UI47 895 aa20.73■□□□□ 0.91
NUP50-208ENST00000430547 DIS3Q9Y2L1 958 aaKnown RBP20.73■□□□□ 0.91
NUP50-208ENST00000430547 IMMTQ16891 758 aaKnown RBP20.72■□□□□ 0.91
NUP50-208ENST00000430547 TRPV1Q8NER1 839 aa20.72■□□□□ 0.91
NUP50-208ENST00000430547 RUFY2Q8WXA3 655 aa20.72■□□□□ 0.91
NUP50-208ENST00000430547 RIPK3Q9Y572 518 aa20.72■□□□□ 0.91
NUP50-208ENST00000430547 SEPT4O43236 478 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 PLA2G6O60733 806 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 IGHA2P01877 340 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 NOVP48745 357 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 NT5C2P49902 561 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 MNX1P50219 401 aaPredicted RBP20.71■□□□□ 0.91
NUP50-208ENST00000430547 ZNF792Q3KQV3 632 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 ANKRD35Q8N283 1001 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 CHST13Q8NET6 341 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 TMEM47Q9BQJ4 181 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 TINF2Q9BSI4 451 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 HOMER2Q9NSB8 354 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 NEDD4P46934 1319 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 RAD50Q92878 1312 aa20.71■□□□□ 0.91
NUP50-208ENST00000430547 SMCHD1A6NHR9 2005 aa20.7■□□□□ 0.9
NUP50-208ENST00000430547 IQCA1Q86XH1 822 aa20.7■□□□□ 0.9
NUP50-208ENST00000430547 TTC14Q96N46 770 aa20.7■□□□□ 0.9
NUP50-208ENST00000430547 NRBP1Q9UHY1 535 aa20.7■□□□□ 0.9
NUP50-208ENST00000430547 CNPY2Q9Y2B0 182 aa20.7■□□□□ 0.9
NUP50-208ENST00000430547 MCM3APO60318 1980 aa20.7■□□□□ 0.9
NUP50-208ENST00000430547 PRAMEF19Q5SWL8 479 aa20.69■□□□□ 0.9
NUP50-208ENST00000430547 RASGRP2Q7LDG7 609 aa20.69■□□□□ 0.9
NUP50-208ENST00000430547 C7orf61Q8IZ16 206 aa20.69■□□□□ 0.9
NUP50-208ENST00000430547 ARRDC4Q8NCT1 418 aa20.69■□□□□ 0.9
NUP50-208ENST00000430547 ACAD9Q9H845 621 aa20.69■□□□□ 0.9
NUP50-208ENST00000430547 PRR12Q9ULL5 1215 aa20.69■□□□□ 0.9
NUP50-208ENST00000430547 MYCNP04198 464 aaPredicted RBP20.68■□□□□ 0.9
NUP50-208ENST00000430547 CCDC178Q5BJE1 867 aa20.68■□□□□ 0.9
NUP50-208ENST00000430547 HABP4Q5JVS0 413 aaKnown RBP20.68■□□□□ 0.9
NUP50-208ENST00000430547 ANO1Q5XXA6 986 aa20.68■□□□□ 0.9
NUP50-208ENST00000430547 CCDC174Q6PII3 467 aa20.68■□□□□ 0.9
NUP50-208ENST00000430547 CHRDL2Q6WN34 429 aa20.68■□□□□ 0.9
NUP50-208ENST00000430547 MSL3Q8N5Y2 521 aaKnown RBP20.68■□□□□ 0.9
NUP50-208ENST00000430547 ZKSCAN3Q9BRR0 538 aa20.68■□□□□ 0.9
NUP50-208ENST00000430547 RNF146Q9NTX7 359 aa20.68■□□□□ 0.9
NUP50-208ENST00000430547 COLQQ9Y215 455 aaPredicted RBP20.68■□□□□ 0.9
NUP50-208ENST00000430547 PFASO15067 1338 aa20.68■□□□□ 0.9
NUP50-208ENST00000430547 KBTBD13C9JR72 458 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms