RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 SNRNP48Q6IEG0 339 aaKnown RBP20.35■□□□□ 0.85
CPSF4-203ENST00000430038 CPXCR1Q8N123 301 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 KIFC2Q96AC6 838 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 LENG1Q96BZ8 264 aaPredicted RBP20.35■□□□□ 0.85
CPSF4-203ENST00000430038 TINF2Q9BSI4 451 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 NACAP1Q9BZK3 213 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 LNPKQ9C0E8 428 aa20.35■□□□□ 0.85
CPSF4-203ENST00000430038 DNAJC25-GNG10A0A024R161 153 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 A0A1W2PPC1 479 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 ZNF865P0CJ78 1059 aaPredicted RBP20.34■□□□□ 0.85
CPSF4-203ENST00000430038 TSPY3P0CV98 308 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 TSPY8P0CW00 308 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 SLC4A3P48751 1232 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 KCTD2Q14681 263 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 SLFN13Q68D06 897 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 GMCL1P1Q8NEA9 526 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 EVI5LQ96CN4 794 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 FGD4Q96M96 766 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 TEX13BQ9BXU2 312 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 SLC38A10Q9HBR0 1119 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 COL6A3P12111 3177 aa20.34■□□□□ 0.85
CPSF4-203ENST00000430038 LTBP2Q14767 1821 aa20.33■□□□□ 0.85
CPSF4-203ENST00000430038 ATP2A1O14983 1001 aa20.33■□□□□ 0.85
CPSF4-203ENST00000430038 MDM2Q00987 491 aaPredicted RBP20.33■□□□□ 0.85
CPSF4-203ENST00000430038 PDE4BQ07343 736 aa20.33■□□□□ 0.85
CPSF4-203ENST00000430038 LRRC41Q15345 812 aa20.33■□□□□ 0.85
CPSF4-203ENST00000430038 ZNF589Q86UQ0 364 aaPredicted RBP20.33■□□□□ 0.85
CPSF4-203ENST00000430038 SMC5Q8IY18 1101 aa20.33■□□□□ 0.85
CPSF4-203ENST00000430038 EXOC6Q8TAG9 804 aa20.33■□□□□ 0.85
CPSF4-203ENST00000430038 SLC5A4Q9NY91 659 aa20.33■□□□□ 0.85
CPSF4-203ENST00000430038 DIS3Q9Y2L1 958 aaKnown RBP20.33■□□□□ 0.85
CPSF4-203ENST00000430038 SNAI1O95863 264 aaPredicted RBP20.32■□□□□ 0.84
CPSF4-203ENST00000430038 IRX5P78411 483 aaPredicted RBP20.32■□□□□ 0.84
CPSF4-203ENST00000430038 B4GALNT3Q6L9W6 998 aa20.32■□□□□ 0.84
CPSF4-203ENST00000430038 SLC39A5Q6ZMH5 540 aa20.32■□□□□ 0.84
CPSF4-203ENST00000430038 FERMT2Q96AC1 680 aa20.32■□□□□ 0.84
CPSF4-203ENST00000430038 ZNF287Q9HBT7 754 aa20.32■□□□□ 0.84
CPSF4-203ENST00000430038 ANAPC4Q9UJX5 808 aa20.32■□□□□ 0.84
CPSF4-203ENST00000430038 FEM1BQ9UK73 627 aa20.32■□□□□ 0.84
CPSF4-203ENST00000430038 ZNF536O15090 1300 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 TMEM232C9JQI7 657 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 PGK1P00558 417 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 FGAP02671 866 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 MYCNP04198 464 aaPredicted RBP20.31■□□□□ 0.84
CPSF4-203ENST00000430038 FGRP09769 529 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 BMP3P12645 472 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 MCCP23508 829 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 ADCYAP1R1P41586 468 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 RTP1P59025 263 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 SNAP25P60880 206 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 NMIQ13287 307 aaPredicted RBP20.31■□□□□ 0.84
CPSF4-203ENST00000430038 HELLSQ9NRZ9 838 aa20.31■□□□□ 0.84
CPSF4-203ENST00000430038 LCTP09848 1927 aa20.3■□□□□ 0.84
CPSF4-203ENST00000430038 ADCY6O43306 1168 aa20.3■□□□□ 0.84
CPSF4-203ENST00000430038 ZBED4O75132 1171 aa20.3■□□□□ 0.84
CPSF4-203ENST00000430038 NOVP48745 357 aa20.3■□□□□ 0.84
CPSF4-203ENST00000430038 ALX1Q15699 326 aa20.3■□□□□ 0.84
CPSF4-203ENST00000430038 PLEKHM2Q8IWE5 1019 aa20.3■□□□□ 0.84
CPSF4-203ENST00000430038 ARRDC4Q8NCT1 418 aa20.3■□□□□ 0.84
CPSF4-203ENST00000430038 SYNPO2Q9UMS6 1093 aa20.3■□□□□ 0.84
CPSF4-203ENST00000430038 HSPD1P10809 573 aaKnown RBP20.29■□□□□ 0.84
CPSF4-203ENST00000430038 SNX17Q15036 470 aa20.29■□□□□ 0.84
CPSF4-203ENST00000430038 KCTD1Q719H9 257 aa20.29■□□□□ 0.84
CPSF4-203ENST00000430038 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.29■□□□□ 0.84
CPSF4-203ENST00000430038 SH3RF1Q7Z6J0 888 aa20.29■□□□□ 0.84
CPSF4-203ENST00000430038 AGBL1Q96MI9 1066 aa20.29■□□□□ 0.84
CPSF4-203ENST00000430038 UBE2OQ9C0C9 1292 aaKnown RBP20.29■□□□□ 0.84
CPSF4-203ENST00000430038 DDX49Q9Y6V7 483 aaKnown RBP20.29■□□□□ 0.84
CPSF4-203ENST00000430038 SLC3A2P08195 630 aaKnown RBP20.28■□□□□ 0.84
CPSF4-203ENST00000430038 COPB2P35606 906 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 CNTN2Q02246 1040 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 TRIM60Q495X7 471 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 MCMDC2Q4G0Z9 681 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 MAMDC4Q6UXC1 1216 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 TDHQ8IZJ6 230 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 DDX11Q96FC9 970 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 GMCL1Q96IK5 515 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 XPNPEP3Q9NQH7 507 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 HOMER2Q9NSB8 354 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 NRBP1Q9UHY1 535 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 STX8Q9UNK0 236 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 ATP11BQ9Y2G3 1177 aa20.28■□□□□ 0.84
CPSF4-203ENST00000430038 TSPY2A6NKD2 308 aa20.27■□□□□ 0.84
CPSF4-203ENST00000430038 KBTBD13C9JR72 458 aa20.27■□□□□ 0.84
CPSF4-203ENST00000430038 ORC4O43929 436 aa20.27■□□□□ 0.84
CPSF4-203ENST00000430038 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
CPSF4-203ENST00000430038 ADAMTS4O75173 837 aa20.27■□□□□ 0.84
CPSF4-203ENST00000430038 STAG1Q8WVM7 1258 aa20.27■□□□□ 0.84
CPSF4-203ENST00000430038 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.84
CPSF4-203ENST00000430038 PHF24Q9UPV7 400 aa20.27■□□□□ 0.84
CPSF4-203ENST00000430038 TRIM43BA6NCK2 446 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 MYADML2A6NDP7 307 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 RARBP10826 455 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 SLC1A4P43007 532 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 HAND2P61296 217 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 NUCB1Q02818 461 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 LRIT3Q3SXY7 679 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 TTBK2Q6IQ55 1244 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 RCSD1Q6JBY9 416 aa20.26■□□□□ 0.83
CPSF4-203ENST00000430038 Q7L0L9 218 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms